RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 NLRC3Q7RTR2 1065 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 MOGAT3Q86VF5 341 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 FAM86B1Q8N7N1 296 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 OR4K13Q8NH42 304 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
VAT1-205ENST00000587173 MYLK2Q9H1R3 596 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 WDR76Q9H967 626 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 SOX21Q9Y651 276 aaPredicted RBP13.14□□□□□ -0.31
VAT1-205ENST00000587173 V9GYQ6 96 aa13.14□□□□□ -0.31
VAT1-205ENST00000587173 TRAV40A0A0B4J280 105 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 F5H5P2 479 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 CLDN34H7C241 214 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 MLNRO43193 412 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 FSTL3O95633 263 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 LCATP04180 440 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 PPIAL4GP0DN37 164 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 HIST1H1CP16403 213 aaKnown RBP13.13□□□□□ -0.31
VAT1-205ENST00000587173 ZNF823P16415 610 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 TPTEP56180 551 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 C9orf139Q6ZV77 190 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 OR8B3Q8NGG8 313 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 OR11L1Q8NGX0 322 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
VAT1-205ENST00000587173 RAB40AQ8WXH6 277 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
VAT1-205ENST00000587173 ERGIC1Q969X5 290 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 OR8B2Q96RD0 313 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 ATF6BQ99941 703 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 TMEM246Q9BRR3 403 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 FUZQ9BT04 418 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 RPRD1BQ9NQG5 326 aaKnown RBP13.13□□□□□ -0.31
VAT1-205ENST00000587173 MAGEL2Q9UJ55 1249 aa13.13□□□□□ -0.31
VAT1-205ENST00000587173 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
VAT1-205ENST00000587173 MGAM2Q2M2H8 2515 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 PLATP00750 562 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 ACSM4P0C7M7 580 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 MNAT1P51948 309 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 RAD23AP54725 363 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 RSPO1Q2MKA7 263 aaPredicted RBP13.12□□□□□ -0.31
VAT1-205ENST00000587173 ZNF404Q494X3 552 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 FAM201AQ5SY85 155 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 PGAP1Q75T13 922 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 ZBTB46Q86UZ6 589 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 LINC00346Q8IVM7 164 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 GNPDA2Q8TDQ7 276 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 SPTSSAQ969W0 71 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 SLCO4A1Q96BD0 722 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 KCNG2Q9UJ96 466 aa13.12□□□□□ -0.31
VAT1-205ENST00000587173 MDFIC2A0A1B0GVS7 189 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 OR6C68A6NDL8 312 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 HLA-DPB1P04440 258 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 FABP3P05413 133 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 HSD17B1P14061 328 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 PMELP40967 661 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 PITPNBP48739 271 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 PRSS12P56730 875 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 TRAP1Q12931 704 aaKnown RBP13.11□□□□□ -0.31
VAT1-205ENST00000587173 GK2Q14410 553 aaPredicted RBP13.11□□□□□ -0.31
VAT1-205ENST00000587173 SAMD4BQ5PRF9 694 aaKnown RBP13.11□□□□□ -0.31
VAT1-205ENST00000587173 CFAP77Q6ZQR2 320 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 MRPL21Q7Z2W9 205 aaKnown RBP13.11□□□□□ -0.31
VAT1-205ENST00000587173 DACT3Q96B18 629 aaPredicted RBP13.11□□□□□ -0.31
VAT1-205ENST00000587173 SLC22A4Q9H015 551 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 CYB5R1Q9UHQ9 305 aa13.11□□□□□ -0.31
VAT1-205ENST00000587173 MEGF8Q7Z7M0 2845 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 A0A1B0GWJ7 208 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 RRM2P31350 389 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 GGT2P36268 569 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 GATA4P43694 442 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 KCNJ8Q15842 424 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 KRTAP27-1Q3LI81 207 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 SLC35F1Q5T1Q4 408 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 RPL13AP3Q6NVV1 102 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 C16orf87Q6PH81 154 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 DCDC5Q6ZRR9 648 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 SPATC1Q76KD6 591 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 NUDT16L1Q9BRJ7 211 aaKnown RBP13.1□□□□□ -0.31
VAT1-205ENST00000587173 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
VAT1-205ENST00000587173 M0R135 149 aa13.09□□□□□ -0.31
VAT1-205ENST00000587173 KRT36O76013 467 aa13.09□□□□□ -0.31
VAT1-205ENST00000587173 SEMG1P04279 462 aa13.09□□□□□ -0.31
VAT1-205ENST00000587173 MDKP21741 143 aaPredicted RBP13.09□□□□□ -0.31
VAT1-205ENST00000587173 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
VAT1-205ENST00000587173 CD200P41217 278 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms