RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 DDOQ99489 341 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 TMEM100Q9NV29 134 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 MRPL22Q9NWU5 206 aaKnown RBP10.48□□□□□ -0.73
SS18-225ENST00000585121 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
SS18-225ENST00000585121 A0A0G2JMP0 313 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 A0A0X1KG70 313 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 M0R135 149 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 PNPP00491 289 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 SPARCP09486 303 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 SBK2P0C263 348 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 ENTPD1P49961 510 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 ERFP50548 548 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 SLC25A1P53007 311 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 ACTR3P61158 418 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 DBPQ10586 325 aaPredicted RBP10.47□□□□□ -0.73
SS18-225ENST00000585121 CRMP1Q14194 572 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 COLCA1Q6ZS62 124 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 PGAP1Q75T13 922 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 KLHL36Q8N4N3 616 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 RFLNBQ8N5W9 214 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 ZNF283Q8N7M2 679 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 OR4M2Q8NGB6 313 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 OR6K6Q8NGW6 343 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 SPRYD4Q8WW59 207 aaPredicted RBP10.47□□□□□ -0.73
SS18-225ENST00000585121 OTULINQ96BN8 352 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 ZNF799Q96GE5 643 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 FEVQ99581 238 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 COPS4Q9BT78 406 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 RBM4Q9BWF3 364 aaKnown RBP10.47□□□□□ -0.73
SS18-225ENST00000585121 WDR76Q9H967 626 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 PDP1Q9P0J1 537 aaPredicted RBP10.47□□□□□ -0.73
SS18-225ENST00000585121 POMPQ9Y244 141 aa10.47□□□□□ -0.73
SS18-225ENST00000585121 NOP16Q9Y3C1 178 aaKnown RBP10.47□□□□□ -0.73
SS18-225ENST00000585121 STAB1Q9NY15 2570 aa10.46□□□□□ -0.73
SS18-225ENST00000585121 ARRDC5A6NEK1 342 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 ZNF593O00488 134 aaPredicted RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 PLPP2O43688 288 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 DEAF1O75398 565 aaPredicted RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 SPI1P17947 270 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 PAICSP22234 425 aaKnown RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 GATA3P23771 443 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 POU1F1P28069 291 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 GRK5P34947 590 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 RAD23AP54725 363 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 RSPO1Q2MKA7 263 aaPredicted RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 SPRNQ5BIV9 151 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 ZNF362Q5T0B9 420 aaPredicted RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 C1orf146Q5VVC0 180 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 MRPL21Q7Z2W9 205 aaKnown RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 DCXRQ7Z4W1 244 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 BHLHE23Q8NDY6 225 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 OR10AD1Q8NGE0 317 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 OR4Q3Q8NH05 313 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 MAP6Q96JE9 813 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 NIPSNAP1Q9BPW8 284 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 SLC30A2Q9BRI3 323 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 TEX12Q9BXU0 123 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 PNRC2Q9NPJ4 139 aaKnown RBP10.46□□□□□ -0.74
SS18-225ENST00000585121 CMC2Q9NRP2 79 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 CENPMQ9NSP4 180 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 COMMD3-BMI1R4GMX3 469 aa10.46□□□□□ -0.74
SS18-225ENST00000585121 LRRC30A6NM36 301 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 J3QLI3 93 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 TCF21O43680 179 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 FOXH1O75593 365 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 IGHV2-70P01814 119 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 GYPBP06028 91 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 RPS27P42677 84 aaKnown RBP10.45□□□□□ -0.74
SS18-225ENST00000585121 SLC15A1P46059 708 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 BTG1P62324 171 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 GK2Q14410 553 aaPredicted RBP10.45□□□□□ -0.74
SS18-225ENST00000585121 TMEM155Q4W5P6 130 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 TEX30Q5JUR7 227 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 DCAF12L2Q5VW00 463 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 DRAM2Q6UX65 266 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 MUC20Q8N307 709 aaPredicted RBP10.45□□□□□ -0.74
SS18-225ENST00000585121 ZNF511Q8NB15 262 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 MEGF10Q96KG7 1140 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 NMNAT2Q9BZQ4 307 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 SLC22A4Q9H015 551 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 METTL17Q9H7H0 456 aaPredicted RBP10.45□□□□□ -0.74
SS18-225ENST00000585121 SP140LQ9H930 580 aa10.45□□□□□ -0.74
SS18-225ENST00000585121 DDX28Q9NUL7 540 aaKnown RBP10.45□□□□□ -0.74
SS18-225ENST00000585121 APOC1P02654 83 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 HMGN1P05114 100 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 ANXA8P13928 327 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 IRF2P14316 349 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 MDH2P40926 338 aaKnown RBP10.44□□□□□ -0.74
SS18-225ENST00000585121 KPNB1Q14974 876 aaKnown RBP10.44□□□□□ -0.74
SS18-225ENST00000585121 SHFQ7M4L6 423 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 NAA40Q86UY6 237 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 LRRC28Q86X40 367 aaPredicted RBP10.44□□□□□ -0.74
SS18-225ENST00000585121 PHC2Q8IXK0 858 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 C1orf87Q8N0U7 546 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 ZNRF4Q8WWF5 429 aa10.44□□□□□ -0.74
SS18-225ENST00000585121 SLAMF6Q96DU3 332 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms