RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 KRTAP10-9P60411 292 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CSNK1G2P78368 415 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 HPCAP84074 193 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CYLC2Q14093 348 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RCAN2Q14206 197 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FASTKQ14296 549 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC17A1Q14916 467 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SSX1Q16384 188 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 HAGHQ16775 308 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PPP1R3AQ16821 1122 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SNAI3Q3KNW1 292 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF718Q3SXZ3 478 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FBXL19-AS1Q494R0 122 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TNFAIP8L3Q5GJ75 292 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CTSL3PQ5NE16 218 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ACER2Q5QJU3 275 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MUC21Q5SSG8 566 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RSBN1Q5VWQ0 802 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM71F2Q6NXP2 309 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM107Q6UX40 140 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 Q6ZS92 163 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 VTCN1Q7Z7D3 282 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LACC1Q8IV20 430 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NUDCD3Q8IVD9 361 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LRRC25Q8N386 305 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CADM2Q8N3J6 435 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF321PQ8N8H1 164 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 FNDC5Q8NAU1 212 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MINDY2Q8NBR6 621 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NUP37Q8NFH4 326 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 B3GNT7Q8NFL0 401 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5D13Q8NGL4 314 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2A1Q8NGT9 310 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SPPL2AQ8TCT8 520 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MRGPRDQ8TDS7 321 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 C10orf35Q96D05 121 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PDXPQ96GD0 296 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ITCHQ96J02 903 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 LRR1Q96L50 414 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TGM7Q96PF1 710 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MS4A4EQ96PG1 132 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ATOH8Q96SQ7 321 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR21Q99679 349 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 HES7Q9BYE0 225 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ULBP3Q9BZM4 244 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NRN1Q9NPD7 142 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 EMC3Q9P0I2 261 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 BAIAP2Q9UQB8 552 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PDE10AQ9Y233 779 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RNF6Q9Y252 685 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 EXOSC1Q9Y3B2 195 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 USH1CQ9Y6N9 552 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 U3KQA8 63 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZFYVE26Q68DK2 2539 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TPRP12270 2363 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 BPTFQ12830 3046 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A1B0GTH9 108 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SERTM2A0A1B0GWG4 89 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 IRGMA1A4Y4 181 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CCDC182A6NF36 153 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ACOD1A6NK06 481 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 RNF212BA8MTL3 300 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 VGLL3A8MV65 326 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 EVPLLA8MZ36 301 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SGK494L7N484 410 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 AZIN1O14977 448 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SERPINB7O75635 380 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 UGT2B17O75795 530 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 APOC1P02654 83 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 P04436 131 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 C2P06681 752 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 UBTFL6P0CB48 400 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 UMPSP11172 480 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 NCK1P16333 377 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ABOP16442 354 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 HNF1AP20823 631 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SERPINA2P20848 420 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CPN2P22792 545 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 IMPA1P29218 277 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 DUTP33316 252 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ACVR1BP36896 505 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PPT1P50897 306 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP1B3P54709 279 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 PLTPP55058 493 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CLDN8P56748 225 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4D2P58180 307 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 MAXP61244 160 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TBPL1P62380 186 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 STX4Q12846 297 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF239Q16600 458 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 DEFB133Q30KQ1 61 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP6AP1LQ52LC2 224 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 XKR7Q5GH72 579 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SPANXN4Q5MJ08 99 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC35E4Q6ICL7 350 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 ACSM5Q6NUN0 579 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 GUSBP11Q6P575 273 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 USP43Q70EL4 1123 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 CYP4Z1Q86W10 505 aa1.63□□□□□ -2.15
SMCHD1-211ENST00000584897 TPRA1Q86W33 373 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms