RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ZNF85Q03923 595 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 MOGQ16653 247 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 TP53I3Q53FA7 332 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 LINC01590Q5TEZ4 76 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 SLC18B1Q6NT16 456 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 RPL22L1Q6P5R6 122 aaKnown RBP8.97□□□□□ -0.97
SS18-221ENST00000582448 KCTD18Q6PI47 426 aaPredicted RBP8.97□□□□□ -0.97
SS18-221ENST00000582448 CXorf67Q86X51 503 aaPredicted RBP8.97□□□□□ -0.97
SS18-221ENST00000582448 MS4A15Q8N5U1 240 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 SYT14Q8NB59 555 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 ZNF485Q8NCK3 441 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 OR6X1Q8NH79 312 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 OR2V1Q8NHB1 315 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 MCFD2Q8NI22 146 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 DYNC2LI1Q8TCX1 351 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 THEM6Q8WUY1 208 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 TMEM203Q969S6 136 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 PERPQ96FX8 193 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 CENPOQ9BU64 300 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 TMED9Q9BVK6 235 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 SF3B5Q9BWJ5 86 aaKnown RBP8.97□□□□□ -0.97
SS18-221ENST00000582448 MED29Q9NX70 200 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 PAQR5Q9NXK6 330 aaPredicted RBP8.97□□□□□ -0.97
SS18-221ENST00000582448 GALNT8Q9NY28 637 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 CCDC59Q9P031 241 aaKnown RBP8.97□□□□□ -0.97
SS18-221ENST00000582448 IKZF2Q9UKS7 526 aa8.97□□□□□ -0.97
SS18-221ENST00000582448 IGLV1-36A0A0B4J1U3 117 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 VGLL3A8MV65 326 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 TNFSF11O14788 317 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 GPRIN2O60269 458 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 GPX5O75715 221 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 SULT1C4O75897 302 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 SYNGR4O95473 234 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 SPARCP09486 303 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 TMIGD3P0DMS9 266 aaPredicted RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 EDNRAP25101 427 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 SHC1P29353 583 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 OPRM1P35372 400 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 CRYBB2P43320 205 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 ENTPD1P49961 510 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 RORCP51449 518 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 OR12D2P58182 307 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 B3GALT5-AS1P59052 145 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 SIRPAP78324 504 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 ROR2Q01974 943 aaKnown RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 SF3B4Q15427 424 aaKnown RBP eCLIP8.96□□□□□ -0.984e-8■■■□□ 18.5
SS18-221ENST00000582448 ZNF404Q494X3 552 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 NSUN5P2Q63ZY6 315 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 ARL9Q6T311 187 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 CHMP1BQ7LBR1 199 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 GLB1L2Q8IW92 636 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 TIGD4Q8IY51 512 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 UBQLNLQ8IYU4 475 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 ZFP41Q8N8Y5 198 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 C9orf106Q8NAJ2 232 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 NOXO1Q8NFA2 376 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 OR6N1Q8NGY5 312 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 S100ZQ8WXG8 99 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 AP3S1Q92572 193 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 CPNE4Q96A23 557 aaPredicted RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 INTS12Q96CB8 462 aaKnown RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 TXNDC15Q96J42 360 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 DACH2Q96NX9 599 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 ZNF649Q9BS31 505 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 MMP27Q9H306 513 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 MARCH7Q9H992 704 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 UBTD1Q9HAC8 227 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 BARX1Q9HBU1 254 aaPredicted RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 HMG20AQ9NP66 347 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 TXNL4BQ9NX01 149 aaKnown RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 CRNNQ9UBG3 495 aaPredicted RBP8.96□□□□□ -0.98
SS18-221ENST00000582448 A3GALT2U3KPV4 340 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 RTTNQ86VV8 2226 aa8.96□□□□□ -0.98
SS18-221ENST00000582448 EXPH5Q8NEV8 1989 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 A0A0J9YW62 118 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 TRBV2A0A0J9YWF9 115 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 A0A1W2PPL8 197 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 DCTN6O00399 190 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 ZNF593O00488 134 aaPredicted RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 PLPP2O43688 288 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 ACTL6AO96019 429 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 IL1AP01583 271 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 CD1AP06126 327 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 CTLA4P16410 223 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 CD79BP40259 229 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 CSNK1A1P48729 337 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 TGM4P49221 684 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 HCCSP53701 268 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 CLDN17P56750 224 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 RPS25P62851 125 aaKnown RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 H3F3AP84243 136 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 SORDQ00796 357 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 SRYQ05066 204 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 SLC3A1Q07837 685 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 FOXF2Q12947 444 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 TM4SF20Q53R12 229 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms