RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RAB25P57735 213 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 MRPS34P82930 218 aaKnown RBP19.98■□□□□ 0.79
CCDC47-204ENST00000582252 SPOCK1Q08629 439 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 COMMD2Q86X83 199 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 NABP1Q96AH0 204 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 SIGLEC12Q96PQ1 595 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF703Q9H7S9 590 aaPredicted RBP19.98■□□□□ 0.79
CCDC47-204ENST00000582252 TMEM138Q9NPI0 162 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 A0A0A6YYH2 397 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 TMEM272A0A1B0GTI8 110 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 A6NJ64 397 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 WT1P19544 449 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-204ENST00000582252 RAB3AP20336 220 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 SOX8P57073 446 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 ENDOGQ14249 297 aaKnown RBP19.97■□□□□ 0.79
CCDC47-204ENST00000582252 DOK3Q7L591 496 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 OR1M1Q8NGA1 313 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 SNIP1Q8TAD8 396 aaKnown RBP19.97■□□□□ 0.79
CCDC47-204ENST00000582252 OR51E1Q8TCB6 317 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 PTX4Q96A99 478 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 FAM122AQ96E09 287 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 ST6GAL2Q96JF0 529 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 TAS2R8Q9NYW2 309 aa19.97■□□□□ 0.79
CCDC47-204ENST00000582252 KLF13Q9Y2Y9 288 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-204ENST00000582252 ANKRD20A5PA0PJZ0 165 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF716A6NP11 495 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 GIFP27352 417 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 HIST1H3AP68431 136 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 ZFP69Q49AA0 526 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 HIST2H3PS2Q5TEC6 136 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 HIST2H3AQ71DI3 136 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 PGAP1Q75T13 922 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 AAED1Q7RTV5 226 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 GPR137CQ8N3F9 429 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 GALNT16Q8N428 558 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 OR8B12Q8NGG6 310 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 OR51A2Q8NGJ7 313 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 OR1J2Q8NGS2 313 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 AKAP1Q92667 903 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCDC47-204ENST00000582252 UQCC2Q9BRT2 126 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 ATG5Q9H1Y0 275 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 NUDT15Q9NV35 164 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 A0A1B0GTI1 187 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 KLK10O43240 276 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 CYTIPO60759 359 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 GABRA1P14867 456 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 CCL1P22362 96 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 FAUP35544 74 aaKnown RBP19.96■□□□□ 0.79
CCDC47-204ENST00000582252 STARP49675 285 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 FAM27BQ5VT28 67 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 DNM1P46Q6ZS02 220 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 BTN2A1Q7KYR7 527 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 ABHD12BQ7Z5M8 362 aaPredicted RBP19.96■□□□□ 0.79
CCDC47-204ENST00000582252 SULF2Q8IWU5 870 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 SLC22A24Q8N4F4 322 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 CCDC54Q8NEL0 328 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 CPT1CQ8TCG5 803 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 NEK6Q9HC98 313 aa19.96■□□□□ 0.79
CCDC47-204ENST00000582252 CGGBP1Q9UFW8 167 aaPredicted RBP19.96■□□□□ 0.79
CCDC47-204ENST00000582252 PAIP2BQ9ULR5 123 aaKnown RBP19.96■□□□□ 0.79
CCDC47-204ENST00000582252 LMX1BO60663 402 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 RBBP9O75884 186 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 MT-ND4P03905 459 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 TMIGD3P0DMS9 266 aaPredicted RBP19.95■□□□□ 0.78
CCDC47-204ENST00000582252 RAB6AP20340 208 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 RRAS2P62070 204 aaPredicted RBP19.95■□□□□ 0.78
CCDC47-204ENST00000582252 SSBP1Q04837 148 aaKnown RBP19.95■□□□□ 0.78
CCDC47-204ENST00000582252 ELFN2Q5R3F8 820 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 OLFML2AQ68BL7 652 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 MTFR2Q6P444 385 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 ZNF813Q6ZN06 617 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 LINC00696Q6ZRV3 163 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 ROBO4Q8WZ75 1007 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 PGAM5Q96HS1 289 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 METTL17Q9H7H0 456 aaPredicted RBP19.95■□□□□ 0.78
CCDC47-204ENST00000582252 HRASLSQ9HDD0 168 aa19.95■□□□□ 0.78
CCDC47-204ENST00000582252 EFNB2P52799 333 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 PLGLB1Q02325 96 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 FAM57BQ71RH2 274 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 CDH26Q8IXH8 852 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 GCDHQ92947 438 aaPredicted RBP19.94■□□□□ 0.78
CCDC47-204ENST00000582252 SPTSSAQ969W0 71 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 ADAT3Q96EY9 351 aaPredicted RBP19.94■□□□□ 0.78
CCDC47-204ENST00000582252 PAQR5Q9NXK6 330 aaPredicted RBP19.94■□□□□ 0.78
CCDC47-204ENST00000582252 ING3Q9NXR8 418 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 MED12Q93074 2177 aa19.94■□□□□ 0.78
CCDC47-204ENST00000582252 URB1O60287 2271 aaKnown RBP19.94■□□□□ 0.78
CCDC47-204ENST00000582252 SULT1C2O00338 296 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 CSF1P09603 554 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 H2AFB2P0C5Z0 115 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 ID4P47928 161 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 CLDN15P56746 228 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 GALK2Q01415 458 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 PLA2G7Q13093 441 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 RIPPLY2Q5TAB7 128 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 LRRC18Q8N456 261 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 MEIOBQ8N635 442 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 OR56B4Q8NH76 319 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 TTTY12Q9BZ98 90 aa19.93■□□□□ 0.78
CCDC47-204ENST00000582252 GPR84Q9NQS5 396 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms