RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 OR2J1Q9GZK6 312 aa12.97□□□□□ -0.33
MKS1-210ENST00000581180 TUBG2Q9NRH3 451 aa12.97□□□□□ -0.33
MKS1-210ENST00000581180 INPP5EQ9NRR6 644 aa12.97□□□□□ -0.33
MKS1-210ENST00000581180 CNOT2Q9NZN8 540 aaKnown RBP12.97□□□□□ -0.33
MKS1-210ENST00000581180 IKZF2Q9UKS7 526 aa12.97□□□□□ -0.33
MKS1-210ENST00000581180 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
MKS1-210ENST00000581180 NOTCH2Q04721 2471 aa12.97□□□□□ -0.33
MKS1-210ENST00000581180 IGLV3-9A0A075B6K5 115 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 DAPL1A0PJW8 107 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 IRGMA1A4Y4 181 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 EFCAB10A6NFE3 127 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 H3BSA7 217 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 FAM20BO75063 409 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 SRSF10O75494 262 aaKnown RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 APOC1P02654 83 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 LIMS3P0CW19 117 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 LIMS4P0CW20 117 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 DCKP27707 260 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 SERPINF1P36955 418 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 SLC6A9P48067 706 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 RIDAP52758 137 aaKnown RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 ZNF121P58317 390 aaPredicted RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 CSNK2BP67870 215 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 GALEQ14376 348 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 SWI5Q1ZZU3 235 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 SNAI3Q3KNW1 292 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 ZNF718Q3SXZ3 478 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 TMEM255AQ5JRV8 349 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 SPATA46Q5T0L3 261 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 MBNL2Q5VZF2 373 aaKnown RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 LHFPL3Q86UP9 236 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 LRP11Q86VZ4 500 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 FBXL14Q8N1E6 418 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 KLF14Q8TD94 323 aaPredicted RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 TRAF4Q9BUZ4 470 aaPredicted RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 FAIMQ9NVQ4 179 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 ERVK13-1Q9NX77 482 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.33
MKS1-210ENST00000581180 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
MKS1-210ENST00000581180 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 METTL15A6NJ78 407 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 VSTM5A8MXK1 200 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 B9A039 149 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 ATE1O95260 518 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 CLPTM1O96005 669 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 PNPP00491 289 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 KRT8P05787 483 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 CD53P19397 219 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 MPV17P39210 176 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 EVX1P49640 407 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 MMP16P51512 607 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 MVKQ03426 396 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 ST3GAL4Q11206 333 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 AGAP6Q5VW22 663 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 FBXW12Q6X9E4 464 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 PLEKHG7Q6ZR37 379 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 OR5L1Q8NGL2 311 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 SYNPRQ8TBG9 265 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 SNX33Q8WV41 574 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
MKS1-210ENST00000581180 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 ALG8Q9BVK2 526 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 Q9H521 79 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 CBLN4Q9NTU7 201 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 FAM206AQ9NX38 181 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 PTTG3PQ9NZH4 202 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 MYEF2Q9P2K5 600 aaKnown RBP12.95□□□□□ -0.34
MKS1-210ENST00000581180 ST6GALNAC2Q9UJ37 374 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 FZR1Q9UM11 496 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 LAMP3Q9UQV4 416 aa12.95□□□□□ -0.34
MKS1-210ENST00000581180 ACOD1A6NK06 481 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 IGHV3-13P01766 116 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 ANXA2P07355 339 aaKnown RBP12.94□□□□□ -0.34
MKS1-210ENST00000581180 OR12D2P58182 307 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 PSG7Q13046 419 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 ZNF829Q3KNS6 432 aaPredicted RBP12.94□□□□□ -0.34
MKS1-210ENST00000581180 TP53I3Q53FA7 332 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 LIPNQ5VXI9 398 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 AHSA2Q719I0 299 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 FAM57BQ71RH2 274 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 KCTD20Q7Z5Y7 419 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 EGFL6Q8IUX8 553 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 YIPF7Q8N8F6 280 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 ZNF540Q8NDQ6 660 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 OR52H1Q8NGJ2 320 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 SYT3Q9BQG1 590 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 SP140LQ9H930 580 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 BRD7Q9NPI1 651 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 G6PC2Q9NQR9 355 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
MKS1-210ENST00000581180 PLEKHA6Q9Y2H5 1048 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 EXOSC1Q9Y3B2 195 aaKnown RBP12.94□□□□□ -0.34
MKS1-210ENST00000581180 R4GMQ9 66 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 PDZD2O15018 2839 aa12.94□□□□□ -0.34
MKS1-210ENST00000581180 TMEM269A0A1B0GVZ9 245 aa12.93□□□□□ -0.34
MKS1-210ENST00000581180 OVOL3O00110 214 aa12.93□□□□□ -0.34
MKS1-210ENST00000581180 RAF1P04049 648 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms