RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 ANKRD16Q6P6B7 361 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 ABHD12BQ7Z5M8 362 aaPredicted RBP11.43□□□□□ -0.58
CTC1-203ENST00000578240 MYPOPQ86VE0 399 aaPredicted RBP11.43□□□□□ -0.58
CTC1-203ENST00000578240 ZNF799Q96GE5 643 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 ZFP3Q96NJ6 502 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 SLC30A2Q9BRI3 323 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 TPK1Q9H3S4 243 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 B3GNT2Q9NY97 397 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 GSTK1Q9Y2Q3 226 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 TIMM10BQ9Y5J6 103 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 PLCE1Q9P212 2302 aa11.43□□□□□ -0.58
CTC1-203ENST00000578240 TRAV8-7A0A075B6U6 113 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 LOC100509620A0A075B734 347 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 F5H5K5 113 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 PRRG2O14669 202 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 RAD51DO75771 328 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 INHBBP09529 407 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 OCM2P0CE71 109 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 UBCP0CG48 685 aaKnown RBP11.42□□□□□ -0.58
CTC1-203ENST00000578240 ADRA2CP18825 462 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 ACHEP22303 614 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 HTR5AP47898 357 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 PER3P56645 1201 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 SF3B4Q15427 424 aaKnown RBP eCLIP11.42□□□□□ -0.588e-7■■■■□ 23.7
CTC1-203ENST00000578240 TAF13Q15543 124 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 GABRA6Q16445 453 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 DGUOKQ16854 277 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 SNAI3Q3KNW1 292 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 CEP78Q5JTW2 689 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 ZNF283Q8N7M2 679 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 ZNF610Q8N9Z0 462 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 GPR148Q8TDV2 347 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 ASB5Q8WWX0 329 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 TMEM106AQ96A25 262 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 BOD1Q96IK1 185 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 LYZL4Q96KX0 146 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 KCNS3Q9BQ31 491 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 WACQ9BTA9 647 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 SLC24A3Q9HC58 644 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 ATPIF1Q9UII2 106 aa11.42□□□□□ -0.58
CTC1-203ENST00000578240 HCFC1P51610 2035 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 TRAV1-2A0A0B4J238 106 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 A0A0G2JNJ9 132 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 ANKRD61A6NGH8 418 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 IL2RAP01589 272 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 HOXD4P09016 255 aaPredicted RBP11.41□□□□□ -0.58
CTC1-203ENST00000578240 CCL1P22362 96 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 PAX7P23759 505 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 THBS2P35442 1172 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 PCBD1P61457 104 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 EIF2S3LQ2VIR3 472 aaKnown RBP11.41□□□□□ -0.58
CTC1-203ENST00000578240 ZNF404Q494X3 552 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 SLC36A2Q495M3 483 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
CTC1-203ENST00000578240 FAM57BQ71RH2 274 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 OR51E1Q8TCB6 317 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 Q9UFV3 132 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 SH3BGRL2Q9UJC5 107 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 PROCRQ9UNN8 238 aa11.41□□□□□ -0.58
CTC1-203ENST00000578240 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 CASKO14936 926 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 APEX1P27695 318 aaKnown RBP11.4□□□□□ -0.58
CTC1-203ENST00000578240 SLC25A35Q3KQZ1 300 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 HSD17B12Q53GQ0 312 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 LRRTM1Q86UE6 522 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 MDP1Q86V88 176 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 CXorf67Q86X51 503 aaPredicted RBP11.4□□□□□ -0.58
CTC1-203ENST00000578240 MCFD2Q8NI22 146 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 TSEN15Q8WW01 171 aaKnown RBP11.4□□□□□ -0.58
CTC1-203ENST00000578240 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 SFXN3Q9BWM7 321 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 HHLA2Q9UM44 414 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 A3GALT2U3KPV4 340 aa11.4□□□□□ -0.58
CTC1-203ENST00000578240 IQCMA0A1B0GVH7 501 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 A0A1W2PR80 420 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 ARL6IP5O75915 188 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 ANXA2P07355 339 aaKnown RBP11.4□□□□□ -0.59
CTC1-203ENST00000578240 CELA3BP08861 270 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 IGFBP3P17936 291 aaPredicted RBP11.4□□□□□ -0.59
CTC1-203ENST00000578240 SLC6A9P48067 706 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 RAB1AP62820 205 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 ECH1Q13011 328 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 DRAM2Q6UX65 266 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 PAMR1Q6UXH9 720 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 STAC2Q6ZMT1 411 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 ZNF704Q6ZNC4 412 aaPredicted RBP11.4□□□□□ -0.59
CTC1-203ENST00000578240 Q6ZSR3 168 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 PAQR4Q8N4S7 273 aaPredicted RBP11.4□□□□□ -0.59
CTC1-203ENST00000578240 WDR31Q8NA23 367 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 RELL2Q8NC24 303 aaPredicted RBP11.4□□□□□ -0.59
CTC1-203ENST00000578240 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.59
CTC1-203ENST00000578240 OR6Q1Q8NGQ2 317 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 PHYHIPQ92561 330 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 CXorf56Q9H5V9 222 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 SMURF1Q9HCE7 757 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 GPR84Q9NQS5 396 aa11.4□□□□□ -0.59
CTC1-203ENST00000578240 A0A075B6Q4 140 aa11.39□□□□□ -0.59
CTC1-203ENST00000578240 A0A0U1RQV5 110 aa11.39□□□□□ -0.59
CTC1-203ENST00000578240 PYCARD-AS1I3L0S3 204 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms