RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CTDSP2O14595 271 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 EIF1AYO14602 144 aaKnown RBP12.29□□□□□ -0.44
SREBF1-217ENST00000577897 TNFSF11O14788 317 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 SIAH2O43255 324 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 OPN1LWP04000 364 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 HPNP05981 417 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 H2BFMP0C1H6 154 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 TMIGD3P0DMS9 266 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-217ENST00000577897 DCTDP32321 178 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 P2RY4P51582 365 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 CLDN17P56750 224 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 TAF13Q15543 124 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 PCK2Q16822 640 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 KRTAP24-1Q3LI83 254 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 CHRFAM7AQ494W8 412 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 IDNKQ5T6J7 187 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 NSUN5P2Q63ZY6 315 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 FAM131AQ6UXB0 335 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-217ENST00000577897 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
SREBF1-217ENST00000577897 GDPD1Q8N9F7 314 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 OR2G2Q8NGZ5 317 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 TXNDC15Q96J42 360 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 ABHD6Q9BV23 337 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 BARHL1Q9BZE3 327 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 SEC61A2Q9H9S3 476 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
SREBF1-217ENST00000577897 CKLFQ9UBR5 152 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
SREBF1-217ENST00000577897 A0A0J9YW62 118 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 LRRC3CA6NJW4 275 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 GPR171O14626 319 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SLC43A1O75387 559 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 UPK3AO75631 287 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SYNGR4O95473 234 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 ABHD16AO95870 558 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 APOC1P02654 83 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 CLEC2LP0C7M8 214 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 OCM2P0CE71 109 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 OCMP0CE72 109 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SRMP19623 302 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SHC1P29353 583 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 LSM6P62312 80 aaKnown RBP12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SF3B4Q15427 424 aaKnown RBP eCLIP12.28□□□□□ -0.441e-14■■■■□ 23.4
SREBF1-217ENST00000577897 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 TMEM244Q5VVB8 128 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 LYPD4Q6UWN0 246 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 LRRN1Q6UXK5 716 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 BAIAP2L2Q6UXY1 529 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 CHMP1BQ7LBR1 199 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-217ENST00000577897 LRRC28Q86X40 367 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-217ENST00000577897 RFLNBQ8N5W9 214 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 OR9K2Q8NGE7 335 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SETD6Q8TBK2 473 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 ATF6BQ99941 703 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 EMC6Q9BV81 110 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 MOB1AQ9H8S9 216 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 ABCB9Q9NP78 766 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 ABCB10Q9NRK6 738 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 SLCO1C1Q9NYB5 712 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 GLTPQ9NZD2 209 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 R4GMQ9 66 aa12.28□□□□□ -0.44
SREBF1-217ENST00000577897 MBD3L3A6NE82 208 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-217ENST00000577897 OR6C65A6NJZ3 312 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 DEFB108AA8MXU0 73 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 PSMD9O00233 223 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 ZFPL1O95159 310 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 IL18BPO95998 194 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 ACTL6AO96019 429 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 QDPRP09417 244 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 HSD11B1P28845 292 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 B3GALT5-AS1P59052 145 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 FOXF2Q12947 444 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 BCL2A1Q16548 175 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 WIPI1Q5MNZ9 446 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-217ENST00000577897 SFXN4Q6P4A7 337 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 DCXRQ7Z4W1 244 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 OR8H2Q8N162 312 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 C9orf106Q8NAJ2 232 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 MBD3L2Q8NHZ7 208 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-217ENST00000577897 TSEN15Q8WW01 171 aaKnown RBP12.27□□□□□ -0.45
SREBF1-217ENST00000577897 C11orf40Q8WZ69 217 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 MCHR2Q969V1 340 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 PDCD1LG2Q9BQ51 273 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 SP140LQ9H930 580 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
SREBF1-217ENST00000577897 PARPBPQ9NWS1 579 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms