RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 VAMP5O95183 116 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 GP1BAP07359 652 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 SFTA3P0C7M3 94 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 TMEM41BQ5BJD5 291 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 SFRP5Q5T4F7 317 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 AGBL4Q5VU57 503 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 ZNF547Q8IVP9 402 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 PTP4A1Q93096 173 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 FRG2CA6NGY1 282 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 SERPINA7P05543 415 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 CD63P08962 238 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 PTHLHP12272 177 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 FOSL1P15407 271 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 CTRB1P17538 263 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 APLNRP35414 380 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 OR2B8PP59922 312 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 H3F3AP84243 136 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 PHLDA2Q53GA4 152 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 CTRB2Q6GPI1 263 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
PTPRM-205ENST00000577827 OR4D10Q8NGI6 311 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 KIRREL1Q96J84 757 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 GAR1Q9NY12 217 aaKnown RBP9.38□□□□□ -0.91
PTPRM-205ENST00000577827 NTMQ9P121 344 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 TP53TG5Q9Y2B4 290 aa9.38□□□□□ -0.91
PTPRM-205ENST00000577827 SBF2Q86WG5 1849 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 LANCL1O43813 399 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 GCM2O75603 506 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PSMB3P49720 205 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 MYO9BQ13459 2157 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 ATPAF1Q5TC12 328 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-205ENST00000577827 AADACL3Q5VUY0 350 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 C15orf54Q8N8G6 183 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 SEMA6DQ8NFY4 1073 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PIGTQ969N2 578 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 FBXO4Q9UKT5 387 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PIGLQ9Y2B2 252 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 TMEM272A0A1B0GTI8 110 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 C9orf170A2RU37 121 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 VSTM5A8MXK1 200 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 H7C1Q1 480 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PRSS54Q6PEW0 395 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 SHISA6Q6ZSJ9 500 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 OR5AP2Q8NGF4 316 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 TPSD1Q9BZJ3 242 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 TMPRSS5Q9H3S3 457 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
PTPRM-205ENST00000577827 POM121BA6NF01 834 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PRAMEF25A6NGN4 478 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 SCGB1D1O95968 90 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 MSR1P21757 451 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 CCR2P41597 374 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
PTPRM-205ENST00000577827 UBE2NP61088 152 aaKnown RBP9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PPP1R1AQ13522 171 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 ZNF345Q14585 488 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 SMAD2Q15796 467 aaKnown RBP9.37□□□□□ -0.91
PTPRM-205ENST00000577827 C19orf48Q6RUI8 117 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 OR4D9Q8NGE8 314 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 IL1F10Q8WWZ1 152 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 COX14Q96I36 57 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 SUCNR1Q9BXA5 334 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 TOLLIPQ9H0E2 274 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 CDH20Q9HBT6 801 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 GPR84Q9NQS5 396 aa9.37□□□□□ -0.91
PTPRM-205ENST00000577827 PLRG1O43660 514 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 LRP3O75074 770 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 CALCRP30988 508 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 RBP2P50120 134 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 ZNF141Q15928 474 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 PRTGQ2VWP7 1150 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 LRRTM1Q86UE6 522 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 FAM185AQ8N0U4 392 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 PRRX2Q99811 253 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 NXT1Q9UKK6 140 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 LRP12Q9Y561 859 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SDCBPO00560 298 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 CBX7O95931 251 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 OPN1LWP04000 364 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 OR5H8P0DN80 308 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SLC2A1P11166 492 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 ST6GAL1P15907 406 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 BCKDHBP21953 392 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 SUMO3P55854 103 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 RAB11AP62491 216 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 INPP5JQ15735 1006 aaPredicted RBP9.36□□□□□ -0.91
PTPRM-205ENST00000577827 Q7L0L9 218 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 LRRC18Q8N456 261 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 OR13H1Q8NG92 308 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 TAAR8Q969N4 342 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 ARSGQ96EG1 525 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 GPA33Q99795 319 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 STRADBQ9C0K7 418 aa9.36□□□□□ -0.91
PTPRM-205ENST00000577827 RAB27BO00194 218 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms