RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 UVRAGQ9P2Y5 699 aa1.05□□□□□ -2.24
TOP2A-202ENST00000577541 MAPK8IP3Q9UPT6 1336 aa1.05□□□□□ -2.24
TOP2A-202ENST00000577541 NEURL4Q96JN8 1562 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 IGLV1-50A0A075B6I6 118 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 IGLV3-12A0A075B6K2 115 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ARPC4-TTLL3A0A0A6YYG9 625 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 A0A0B4J2A0 478 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 IGHV5-10-1A0A0J9YXX1 117 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 KBTBD11-OT1A0A1B0GTJ5 212 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 H0YJW9 148 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 BOLA2-SMG1P6H3BVE0 249 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 SOCS1O15524 211 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 RRP8O43159 456 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ERI3O43414 337 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CCNKO75909 580 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 TDP2O95551 362 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 RAB3DO95716 219 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 IGLV2-8P01709 118 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 OR8U9P0C7N5 309 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ZNF806P0C7X5 589 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 LINC00869P0C866 280 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 POLR2MP0CAP2 368 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 STAG3L3P0CL85 134 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 SRMP19623 302 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 U2AF2P26368 475 aaKnown RBP eCLIP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 TGFBR1P36897 503 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CFHR2P36980 270 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 MYCNOSP40205 109 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 MRPL19P49406 292 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 RAB7AP51149 207 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 UBE2E1P51965 193 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CDKN2DP55273 166 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 GFERP55789 205 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 PPP1CBP62140 327 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 RBMY1FQ15415 496 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 TSC22D1Q15714 1073 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 FBXW9Q5XUX1 488 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ASCL4Q6XD76 172 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ABHD13Q7L211 337 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 TMEM150AQ86TG1 271 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CALHM3Q86XJ0 350 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 FAM71AQ8IYT1 594 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CMTM8Q8IZV2 173 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 OSR2Q8N2R0 312 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 LINC00304Q8N9R0 145 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 GATSQ8NAP1 163 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 OR4K5Q8NGD3 323 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ZNF461Q8TAF7 563 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 OR51E1Q8TCB6 317 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 TSEN15Q8WW01 171 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 NRBF2Q96F24 287 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 PDXPQ96GD0 296 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 OR10C1Q96KK4 312 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 UBE2E2Q96LR5 201 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ZNF488Q96MN9 340 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 NAP1L5Q96NT1 182 aaPredicted RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 XPO6Q96QU8 1125 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 PLIN2Q99541 437 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 GGTLC1Q9BX51 225 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 SLIRPQ9GZT3 109 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 FBXO44Q9H4M3 255 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 SYNDIG1Q9H7V2 258 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CYP3A43Q9HB55 503 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 MRPS30Q9NP92 439 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 PXMP2Q9NR77 195 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 FBXO8Q9NRD0 319 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 C8orf17Q9NRJ1 99 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 ZNF355PQ9NSJ1 428 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CLN6Q9NWW5 311 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 CLN8Q9UBY8 286 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 SHPKQ9UHJ6 478 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 PSME2Q9UL46 239 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 YARS2Q9Y2Z4 477 aaKnown RBP1.04□□□□□ -2.24
TOP2A-202ENST00000577541 N6AMT1Q9Y5N5 214 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 KCNE3Q9Y6H6 103 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 KIF27Q86VH2 1401 aa1.04□□□□□ -2.24
TOP2A-202ENST00000577541 COL5A1P20908 1838 aaPredicted RBP1.03□□□□□ -2.24
TOP2A-202ENST00000577541 TSPAN11A1L157 253 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 C7orf66A4D0T2 115 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 GABRR3A8MPY1 467 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 A8MUU9 505 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 KRBOX1C9JBD0 128 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 DNASE2O00115 360 aaPredicted RBP1.03□□□□□ -2.24
TOP2A-202ENST00000577541 RAD51CO43502 376 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 SLC19A2O60779 497 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 WBP4O75554 376 aaKnown RBP1.03□□□□□ -2.24
TOP2A-202ENST00000577541 SERPINB7O75635 380 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 LSM8O95777 96 aaKnown RBP1.03□□□□□ -2.24
TOP2A-202ENST00000577541 PTTG1O95997 202 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 IGLV3-25P01717 112 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 HBE1P02100 147 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 KRT16P08779 473 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CT45A6P0DMU7 189 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CT45A5P0DMU8 189 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CT45A7P0DMV0 189 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 IGHV1-8P0DP01 117 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CALM1P0DP23 149 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CALM2P0DP24 149 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CALM3P0DP25 149 aa1.03□□□□□ -2.24
TOP2A-202ENST00000577541 CD37P11049 281 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms