RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SLC22A5O76082 557 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SERPINA1P01009 418 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 UBCP0CG48 685 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 SMIM10L1P0DMW3 83 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 PNMTP11086 282 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 NPR2P20594 1047 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 ATP6V1B2P21281 511 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 S100A7P31151 101 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 CYLC1P35663 651 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 ARR3P36575 388 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RPL5P46777 297 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 GNPDA1P46926 289 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 MRPL19P49406 292 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 SRP9P49458 86 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 ACOT2P49753 483 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RGS4P49798 205 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SERPINH1P50454 418 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 RAB9AP51151 201 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 CRYBA4P53673 196 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 GEMP55040 296 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 DNAJB13P59910 316 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SEC61GP60059 68 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RAP1BP61224 184 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 NCALDP61601 193 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RPL32P62910 135 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 HERVK_113P63132 956 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 CCL7P80098 99 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 GTF2BQ00403 316 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 MYBPC1Q00872 1141 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 CHRNB3Q05901 458 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 BNIP2Q12982 314 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 BTN1A1Q13410 526 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 XKR7Q5GH72 579 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 PIGGQ5H8A4 983 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 PPM1LQ5SGD2 360 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SYPL2Q5VXT5 272 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RAET1LQ5VY80 246 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 OR8G2PQ6IF36 304 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 PRR5LQ6MZQ0 368 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SLC39A4Q6P5W5 647 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 UNQ9370/PRO34162Q6UXP9 181 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 ARCQ7LC44 396 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 ZNF546Q86UE3 836 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 GPBP1Q86WP2 473 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 LRRC75A-AS1Q8N1F1 130 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 LYPD1Q8N2G4 141 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 GTPBP8Q8N3Z3 284 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 KIF2BQ8N4N8 673 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 C2orf73Q8N5S3 287 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 MFSD9Q8NBP5 474 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 FBXL13Q8NEE6 735 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 OR4M2Q8NGB6 313 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 KCNG3Q8TAE7 436 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 TRMT10AQ8TBZ6 339 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 BLOC1S5Q8TDH9 187 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 C16orf78Q8WTQ4 265 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SDR42E1Q8WUS8 393 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SFT2D1Q8WV19 159 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 TRUB1Q8WWH5 349 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 LHX4Q969G2 390 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SMIM10Q96HG1 83 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 WFIKKN1Q96NZ8 548 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 CHRDL1Q9BU40 450 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SRRQ9GZT4 340 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 ILKAPQ9H0C8 392 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 C1orf198Q9H425 327 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 TRABDQ9H4I3 376 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 WDR54Q9H977 334 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 ROPN1Q9HAT0 212 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 WFDC1Q9HC57 220 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RAB18Q9NP72 206 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 NANSQ9NR45 359 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SIRT7Q9NRC8 400 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RDH8Q9NYR8 311 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 OR12D3Q9UGF7 316 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 OR52A1Q9UKL2 312 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 RPL26L1Q9UNX3 145 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 ZNF337Q9Y3M9 751 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 POLR3HQ9Y535 204 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 OR51B4Q9Y5P0 310 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 TSSC4Q9Y5U2 329 aaPredicted RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 KPTNQ9Y664 436 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 WSB1Q9Y6I7 421 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 HSPE1-MOB4S4R3N1 261 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 CLIP1P30622 1438 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 NCAPD2Q15021 1401 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SPATA31E1Q6ZUB1 1445 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 MTCL1Q9Y4B5 1905 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 TRAV26-1A0A087WT03 109 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 CCDC160A6NGH7 325 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 ZNF99A8MXY4 864 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 ANKRD63C9JTQ0 380 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 RNASEK-C17orf49H0YIS7 233 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 M0QXV9 152 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 DNASE2O00115 360 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 KPNA3O00505 521 aaPredicted RBP2.55□□□□□ -2
SMCHD1-202ENST00000577300 AZIN1O14977 448 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 RGS5O15539 181 aa2.55□□□□□ -2
SMCHD1-202ENST00000577300 KLRC4O43908 158 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms