RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
CTDNEP1-211ENST00000575783 RIMS3Q9UJD0 308 aa13.32□□□□□ -0.28
CTDNEP1-211ENST00000575783 HIF3AQ9Y2N7 669 aa13.32□□□□□ -0.28
CTDNEP1-211ENST00000575783 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
CTDNEP1-211ENST00000575783 GMEB1Q9Y692 573 aa13.32□□□□□ -0.28
CTDNEP1-211ENST00000575783 TRBV5-3A0A0A0MS03 114 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 A0A1B0GWJ7 208 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 RER1O15258 196 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 RGS16O15492 202 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 CD33P20138 364 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 SAA4P35542 130 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 STX1BP61266 288 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 OR8G1Q15617 311 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 KRT71Q3SY84 523 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 PGBD2Q6P3X8 592 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 BLOC1S3Q6QNY0 202 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 MICU2Q8IYU8 434 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 CMTM4Q8IZR5 234 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 OR51A7Q8NH64 312 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 TAMM41Q96BW9 452 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 ZBTB9Q96C00 473 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 RERGLQ9H628 205 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 SSU72Q9NP77 194 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
CTDNEP1-211ENST00000575783 IGHV3OR15-7A0A075B7D8 119 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 WI2-2373I1.2A0A1W2PRP0 233 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 SHOX2O60902 331 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 SNNO75324 88 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 PPP1R3DO95685 299 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 IGF2P01344 180 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 TNFRSF1BP20333 461 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 CA6P23280 308 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 PIN1Q13526 163 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 METAP1DQ6UB28 335 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 PATL1Q86TB9 770 aaKnown RBP13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 FAM90A1Q86YD7 464 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 ANKRD42Q8N9B4 389 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 LRRC8CQ8TDW0 803 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 SPRYD4Q8WW59 207 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 SSX3Q99909 188 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 OCSTAMPQ9BR26 566 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 C1orf123Q9NWV4 160 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 MAB21L2Q9Y586 359 aa13.3□□□□□ -0.28
CTDNEP1-211ENST00000575783 TRAV27A0A087WT01 109 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 MSX2P35548 267 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 GK2Q14410 553 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 C11orf91Q3C1V1 193 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 NDUFA11Q86Y39 141 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 LRRC75AQ8NAA5 344 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 LY6G5BQ8NDX9 201 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 RORBQ92753 470 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 SLCO4A1Q96BD0 722 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 NKX3-1Q99801 234 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 CITED2Q99967 270 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 FAM234AQ9H0X4 552 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 CENPHQ9H3R5 247 aa13.29□□□□□ -0.28
CTDNEP1-211ENST00000575783 A0A1B0GW55 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 OR5F1O95221 314 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 GRPP07492 148 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L2P0CJ85 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L3P0CJ86 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L4P0CJ87 422 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L5P0CJ88 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L6P0CJ89 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L7P0CJ90 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 IFI30P13284 250 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 CTLA4P16410 223 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 ELF3P78545 371 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4L9Q6RFH8 374 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 Q8N7P7 452 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 BEND2Q8NDZ0 799 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 C17orf50Q8WW18 174 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 CCL13Q99616 98 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 RANBP3Q9H6Z4 567 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 GRHPRQ9UBQ7 328 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 DUX4Q9UBX2 424 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 COA3Q9Y2R0 106 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
CTDNEP1-211ENST00000575783 TEX13CA0A0J9YWL9 993 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 hCG_1807616A0A1W2PRN6 198 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 XKRYO14609 159 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 RPL4P36578 427 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 MTPNP58546 118 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 KRTAP10-11P60412 298 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 LSM6P62312 80 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 SELPLGQ14242 412 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 DLEU7Q6UYE1 221 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 PGAP1Q75T13 922 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 GLB1L2Q8IW92 636 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 WFDC9Q8NEX5 89 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 OR51G2Q8NGK0 314 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 NPFFR1Q9GZQ6 430 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 RAB18Q9NP72 206 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
CTDNEP1-211ENST00000575783 ATPIF1Q9UII2 106 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms