RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 RPS6KA6Q9UK32 745 aa14.44□□□□□ -0.1
CCDC40-211ENST00000574099 A4GNTQ9UNA3 340 aa14.44□□□□□ -0.1
CCDC40-211ENST00000574099 A0A1B0GWJ7 208 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 A0A1W2PRD5 423 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 A0A1W2PRF3 423 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 A0A1W2PRM7 423 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 ANKRD61A6NGH8 418 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 KHDRBS3O75525 346 aaKnown RBP14.43□□□□□ -0.1
CCDC40-211ENST00000574099 CD14P08571 375 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 ZNF26P17031 533 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-211ENST00000574099 LSM6P62312 80 aaKnown RBP14.43□□□□□ -0.1
CCDC40-211ENST00000574099 POU4F2Q12837 409 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 KRR1Q13601 381 aaKnown RBP14.43□□□□□ -0.1
CCDC40-211ENST00000574099 HERPUD1Q15011 391 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 OR8G1Q15617 311 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 MEP1BQ16820 701 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 RABL3Q5HYI8 236 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 CORO6Q6QEF8 472 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 GLB1L2Q8IW92 636 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 FGFRL1Q8N441 504 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 ST8SIA4Q92187 359 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 TPD52L3Q96J77 140 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 RABEP2Q9H5N1 569 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 FN3KRPQ9HA64 309 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 ONECUT1Q9UBC0 465 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 DNAJB11Q9UBS4 358 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 SIGLEC9Q9Y336 463 aa14.43□□□□□ -0.1
CCDC40-211ENST00000574099 OOEPA6NGQ2 149 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 DVL1O14640 695 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 FBP1P09467 338 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 CA6P23280 308 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 TGFBR2P37173 567 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 CENPAP49450 140 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 DLX1P56177 255 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 PRKCDQ05655 676 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 GK2Q14410 553 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-211ENST00000574099 CYBRD1Q53TN4 286 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 SLC35E4Q6ICL7 350 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 FAM122BQ7Z309 247 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 COQ7Q99807 217 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 HDHD2Q9H0R4 259 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 SIRT7Q9NRC8 400 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 FOXJ3Q9UPW0 622 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 LHFPL6Q9Y693 200 aa14.42□□□□□ -0.1
CCDC40-211ENST00000574099 IGHV3OR15-7A0A075B7D8 119 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 TRAV38-1A0A0B4J264 116 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 HTR3EA5X5Y0 456 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 J3KTA2 159 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 CDC42EP2O14613 210 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 GABRA5P31644 462 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 IFNA8P32881 189 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 LOXL3P58215 753 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 ANKDD1AQ495B1 522 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 CDONQ4KMG0 1287 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 OXLD1Q5BKU9 147 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 NANOGP8Q6NSW7 305 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 SPRYD4Q8WW59 207 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-211ENST00000574099 SLCO4A1Q96BD0 722 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 ITPKCQ96DU7 683 aa14.41□□□□□ -0.1
CCDC40-211ENST00000574099 ADAT1Q9BUB4 502 aaKnown RBP14.41□□□□□ -0.1
CCDC40-211ENST00000574099 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC40-211ENST00000574099 CAB39Q9Y376 341 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-211ENST00000574099 A0A1B0GVI7 797 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 A0A1B0GW55 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 SOCS2O14508 198 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 AHCYL1O43865 530 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 IFNA14P01570 189 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L2P0CJ85 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L3P0CJ86 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L4P0CJ87 422 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L5P0CJ88 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L6P0CJ89 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L7P0CJ90 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 KLRD1Q13241 179 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4L9Q6RFH8 374 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-211ENST00000574099 TBPL2Q6SJ96 375 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 ZNF730Q6ZMV8 503 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 COLCA1Q6ZS62 124 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 C1orf122Q6ZSJ8 110 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 ZNF826PQ6ZT77 177 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 NAA40Q86UY6 237 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 CALHM3Q86XJ0 350 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 FAM90A1Q86YD7 464 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 LYG1Q8N1E2 194 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 GALNT4Q8N4A0 578 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 GJC3Q8NFK1 279 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 TLCD1Q96CP7 247 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 ZNF583Q96ND8 569 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 FNDC11Q9BVV2 318 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 NUAK2Q9H093 628 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 CNTD2Q9H8S5 307 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 AURKAIP1Q9NWT8 199 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-211ENST00000574099 C1orf123Q9NWV4 160 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 DUX4Q9UBX2 424 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 RPUSD1Q9UJJ7 312 aaKnown RBP14.4□□□□□ -0.1
CCDC40-211ENST00000574099 SNX13Q9Y5W8 968 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 KPTNQ9Y664 436 aa14.4□□□□□ -0.1
CCDC40-211ENST00000574099 hCG_1807616A0A1W2PRN6 198 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 A6NLC8 198 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms