RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 H7C417 338 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 M0QXV9 152 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 PLPP3O14495 311 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 LIN7AO14910 233 aaPredicted RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 AQP9O43315 295 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ACTL6AO96019 429 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 GP1BAP07359 652 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 GNAO1P09471 354 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 OR5AL1P0C617 328 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 GOLGA8HP0CJ92 632 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 PET100P0DJ07 73 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 SMIM10L1P0DMW3 83 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 IGHV3-43DP0DP04 118 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CD37P11049 281 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ERGP11308 486 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 TDGF1P13385 188 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 FOLR2P14207 255 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 MYL9P24844 172 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CCNE1P24864 410 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CEACAM6P40199 344 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 HCAR3P49019 387 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 MEOX2P50222 304 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 TDGF1P3P51864 188 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 STX17P56962 302 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 MRPS15P82914 257 aaKnown RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 PITPNAQ00169 270 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 REG3AQ06141 175 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 C2orf54Q08AI8 447 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 FLOT2Q14254 428 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 GPNMBQ14956 572 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 KIAA0040Q15053 153 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 PON3Q15166 354 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ZBTB6Q15916 424 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 SGCAQ16586 387 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 Q1RN00 199 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 BSXQ3C1V8 233 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CHRFAM7AQ494W8 412 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 COA6Q5JTJ3 125 aaKnown RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 CDKL4Q5MAI5 379 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ATAD3CQ5T2N8 411 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CASC10Q5T4H9 136 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 RESP18Q5W5W9 173 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 AP1ARQ63HQ0 302 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 OR2T5Q6IEZ7 315 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 PAMR1Q6UXH9 720 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 BAIAP2L2Q6UXY1 529 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 COX15Q7KZN9 410 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 SSX7Q7RTT5 188 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ZNF440Q8IYI8 595 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 DAW1Q8N136 415 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 POM121L12Q8N7R1 296 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ZNF565Q8N9K5 539 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ZNF738Q8NE65 137 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 KLHL30-AS1Q8NEE0 82 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 OR10W1Q8NGF6 305 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 OR2T29Q8NH02 315 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 RHOXF1Q8NHV9 184 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 MCOLN3Q8TDD5 553 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 DOK4Q8TEW6 326 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 C7orf33Q8WU49 177 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 TMEM234Q8WY98 164 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ITFG2Q969R8 447 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 AURKBQ96GD4 344 aaPredicted RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 SMIM10Q96HG1 83 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ADTRPQ96IZ2 230 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 BTN2A3PQ96KV6 586 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 RNF145Q96MT1 663 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 RASL11BQ9BPW5 248 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 NRIP2Q9BQI9 281 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 DCUN1D5Q9BTE7 237 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 PAXXQ9BUH6 204 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 SPZ1Q9BXG8 430 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 WDR55Q9H6Y2 383 aaPredicted RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 ISYNA1Q9NPH2 558 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 IFT46Q9NQC8 304 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CCL28Q9NRJ3 127 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 IMP3Q9NV31 184 aaKnown RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 C1orf109Q9NX04 203 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 MTFP1Q9UDX5 166 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CYB5R1Q9UHQ9 305 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 TRMT112Q9UI30 125 aaKnown RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 KLK13Q9UKR3 277 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 CBY1Q9Y3M2 126 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 KLF12Q9Y4X4 402 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 NEUROG3Q9Y4Z2 214 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 OR51B2Q9Y5P1 312 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 HEBP2Q9Y5Z4 205 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 UBIAD1Q9Y5Z9 338 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 ADAMTSL3P82987 1691 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 PCSK5Q92824 1860 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 A0A087WYN8 130 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 IGHV2OR16-5A0A0B4J2B6 119 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 GOLGA8IPA6NC78 632 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 GOLGA6L10A6NI86 522 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 PEX7O00628 323 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 LINC01565O15544 149 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 COCHO43405 550 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 PI15O43692 258 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 FAM189A1O60320 539 aa1.55□□□□□ -2.16
CHD3-217ENST00000574022 ZNF354AO60765 605 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms