RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 BPNT1O95861 308 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 PMP2P02689 132 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 PGAM2P15259 253 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 ARL5BQ96KC2 179 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 TSNAXQ99598 290 aaKnown RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 CHMP1AQ9HD42 196 aaPredicted RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 MED29Q9NX70 200 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 SPEGQ15772 3267 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 RAB19A4D1S5 217 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 C2orf72A6NCS6 295 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 TTRP02766 147 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 PRKACAP17612 351 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 DAP3P51398 398 aaKnown RBP13.93□□□□□ -0.18
NUP88-207ENST00000573584 POU3F1Q03052 451 aaPredicted RBP13.93□□□□□ -0.18
NUP88-207ENST00000573584 C5orf46Q6UWT4 87 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 GKN2Q86XP6 184 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 GTPBP8Q8N3Z3 284 aaPredicted RBP13.93□□□□□ -0.18
NUP88-207ENST00000573584 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 OR4K17Q8NGC6 315 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 RLN3Q8WXF3 142 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 ZDHHC12Q96GR4 267 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 KCNK17Q96T54 332 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 C8orf33Q9H7E9 229 aaPredicted RBP13.93□□□□□ -0.18
NUP88-207ENST00000573584 FN3KRPQ9HA64 309 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 FAM206AQ9NX38 181 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 MYO15AQ9UKN7 3530 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 THADAQ6YHU6 1953 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 RP1P56715 2156 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 CRHP06850 196 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 CCDC157Q569K6 752 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 KLHL24Q6TFL4 600 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 H1FNTQ75WM6 255 aaPredicted RBP13.93□□□□□ -0.18
NUP88-207ENST00000573584 ANGPTL5Q86XS5 388 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 OR13C9Q8NGT0 318 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 MARCH1Q8TCQ1 289 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 PIK3IP1Q96FE7 263 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 UQCC2Q9BRT2 126 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 HPF1Q9NWY4 346 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 CSAG2Q9Y5P2 127 aa13.93□□□□□ -0.18
NUP88-207ENST00000573584 H3BMH7 237 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 GPR31O00270 319 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 IGLV3-19P01714 112 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 SERPINF1P36955 418 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 SHHQ15465 462 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 RTN4RL2Q86UN3 420 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 OR5D14Q8NGL3 314 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 DCUN1D4Q92564 292 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 SLAMF6Q96DU3 332 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 MVB12AQ96EY5 273 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 FOXQ1Q9C009 403 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 PBOV1Q9GZY1 135 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 CHRNA10Q9GZZ6 450 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 WBP1LQ9NX94 342 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 TRIOO75962 3097 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 SIGLEC6O43699 453 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 SSX5O60225 188 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 ARL4DP49703 201 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 FLI1Q01543 452 aaPredicted RBP13.92□□□□□ -0.18
NUP88-207ENST00000573584 AWAT2Q6E213 333 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 COX15Q7KZN9 410 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 OR4K15Q8NH41 348 aa13.92□□□□□ -0.18
NUP88-207ENST00000573584 SCGNO76038 276 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 FBLP22087 321 aaKnown RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 HSF1Q00613 529 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 TLE3Q04726 772 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ZP4Q12836 540 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ZNF101Q8IZC7 436 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 SVBPQ8N300 66 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 DEFB119Q8N690 84 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 OR10H5Q8NGA6 315 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 PAQR8Q8TEZ7 354 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 C11orf40Q8WZ69 217 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ZNF304Q9HCX3 659 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 SLC5A6Q9Y289 635 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 LAMA1P25391 3075 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 CPAMD8Q8IZJ3 1885 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 DBX1A6NMT0 343 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ZNF217O75362 1048 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 TPT1P13693 172 aaKnown RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 TBPP20226 339 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 ZNF93P35789 620 aaPredicted RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 EMP2P54851 167 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 CLDN6P56747 220 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 DEFB133Q30KQ1 61 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 C1orf189Q5VU69 101 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 PTCRAQ6ISU1 281 aaPredicted RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 C16orf47Q6ZP98 133 aaPredicted RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 Q6ZS52 159 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 PUSL1Q8N0Z8 303 aaKnown RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 OR2I1PQ8NGU4 316 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 C5orf34Q96MH7 638 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 NICN1Q9BSH3 213 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 EMC6Q9BV81 110 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 SAV1Q9H4B6 383 aaPredicted RBP13.91□□□□□ -0.18
NUP88-207ENST00000573584 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
NUP88-207ENST00000573584 FGF16O43320 207 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms