RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 U3KQV3 271 aa8.13□□□□□ -1.11
NPLOC4-212ENST00000573328 ANK2Q01484 3957 aa8.13□□□□□ -1.11
NPLOC4-212ENST00000573328 CEACAM18A8MTB9 384 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 TMEM178BH3BS89 294 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 BHLHE40O14503 412 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 MLNRO43193 412 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 GASTP01350 101 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 HLA-DPB1P04440 258 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 SPARCP09486 303 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 CALB2P22676 271 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 FPR2P25090 351 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 ZFP36P26651 326 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 GGT2P36268 569 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 MAGEA2P43356 314 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 HILS1P60008 231 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 GK2Q14410 553 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 OR8G1Q15617 311 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 RASSF6Q6ZTQ3 369 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 LRRC28Q86X40 367 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 ARHGAP24Q8N264 748 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 LNX2Q8N448 690 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 FITM2Q8N6M3 262 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 SLC37A3Q8NCC5 494 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 CCDC197Q8NCU1 140 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 OR4C15Q8NGM1 316 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 OR8D4Q8NGM9 314 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 OR6K6Q8NGW6 343 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 ZFAND2BQ8WV99 257 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 SLCO4A1Q96BD0 722 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 SIGLEC11Q96RL6 698 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 CCT8L2Q96SF2 557 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 SLC30A2Q9BRI3 323 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 C1QTNF5Q9BXJ0 243 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 TRIM15Q9C019 465 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 MAGIXQ9H6Y5 334 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 ARMC1Q9NVT9 282 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 LRCH1Q9Y2L9 728 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 AUP1Q9Y679 476 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 COMMD3-BMI1R4GMX3 469 aa8.12□□□□□ -1.11
NPLOC4-212ENST00000573328 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 PPIAL4CA0A0B4J2A2 164 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 TCRBV5S2A0A599 114 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 GGT3PA6NGU5 568 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 RIIAD1A6NNX1 92 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 IFNGP01579 166 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 GYPBP06028 91 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF3P17036 446 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 FMO3P31513 532 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 ENTPD1P49961 510 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 GNB2P62879 340 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 CRMP1Q14194 572 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 TRIM25Q14258 630 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 OR2T5Q6IEZ7 315 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 LCN8Q6JVE9 175 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 RBMS3Q6XE24 437 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 USP43Q70EL4 1123 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 SPATC1Q76KD6 591 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 DCXRQ7Z4W1 244 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 OR2T33Q8NG76 320 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 OR11L1Q8NGX0 322 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 OR2T29Q8NH02 315 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 OR2AE1Q8NHA4 323 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 TEX47Q8TBZ9 253 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 GCDHQ92947 438 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 POP5Q969H6 163 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 OTULINQ96BN8 352 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 PLEKHA8Q96JA3 519 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 MAP6Q96JE9 813 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 ADAT1Q9BUB4 502 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 RBM4Q9BWF3 364 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 SSBP3Q9BWW4 388 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 PNRC2Q9NPJ4 139 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 MMP26Q9NRE1 261 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 CENPMQ9NSP4 180 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 UFSP2Q9NUQ7 469 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 IL20Q9NYY1 176 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 BAIAP2Q9UQB8 552 aa8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 NOP16Q9Y3C1 178 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-212ENST00000573328 A8MXK9 166 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF878C9JN71 531 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 F5H0A9 414 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 H3BN98 237 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 GNGT2O14610 69 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 TBX1O43435 398 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 FAM107AO95990 144 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 SLC2A1P11166 492 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 CA6P23280 308 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 HSD11B1P28845 292 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 PRKXP51817 358 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 HMGA2P52926 109 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF154Q13106 437 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 MICAQ29983 383 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 RSPO1Q2MKA7 263 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms