RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SOX18P35713 384 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 CRYBA2P53672 197 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 HYAL4Q2M3T9 481 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 RGS7BPQ6MZT1 257 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 CSNK2A3Q8NEV1 391 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 SLC30A7Q8NEW0 376 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ASB5Q8WWX0 329 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 PHYHIPQ92561 330 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ITPKCQ96DU7 683 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 FBXO17Q96EF6 278 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ASCL3Q9NQ33 180 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 FBXL3Q9UKT7 428 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 MRPS28Q9Y2Q9 187 aaKnown RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 RHBDD3Q9Y3P4 386 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 FLVCR1Q9Y5Y0 555 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 TRDV1A0A1B0GX56 115 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 ZNF850A8MQ14 1090 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 SCGNO76038 276 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 CCL2P13500 99 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 SPNP16150 400 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 SELEP16581 610 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 HTR2CP28335 458 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 LY6DQ14210 128 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 GLYATL3Q5SZD4 288 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 SLC22A24Q8N4F4 322 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 SMIM19Q96E16 107 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 CEP295Q9C0D2 2601 aa8.96□□□□□ -0.97
SMG6-213ENST00000573166 SSX4O60224 188 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 UPK3AO75631 287 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 NEURL1O76050 574 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 PRSS3P35030 304 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 DMRTC1Q5HYR2 192 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 TMED4Q7Z7H5 227 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 PARP16Q8N5Y8 322 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 WNT2BQ93097 391 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 SLC7A10Q9NS82 523 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 DEPPQ9NTK1 212 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 B3GAT1Q9P2W7 334 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 SCP2D1Q9UJQ7 156 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 PTPRQQ9UMZ3 2332 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 IGKV1D-42A0A075B6H8 117 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 ZIC3O60481 467 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 UPK1BO75841 260 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 AQP8O94778 261 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 GABARAPO95166 117 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 SRMP19623 302 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 TGM1P22735 817 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 STOMP27105 288 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 GPR176Q14439 515 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 DRAM2Q6UX65 266 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 BHLHA15Q7RTS1 189 aaPredicted RBP8.96□□□□□ -0.98
SMG6-213ENST00000573166 OR13C5Q8NGS8 318 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 SYNPRQ8TBG9 265 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 SPACA5Q96QH8 159 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 TMEM59Q9BXS4 323 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 DNTTIP1Q9H147 329 aa8.96□□□□□ -0.98
SMG6-213ENST00000573166 ADAMTS9Q9P2N4 1935 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 SNRPD2P62316 118 aaKnown RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 Q0VFX4 171 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ZP4Q12836 540 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 TBRG1Q3YBR2 411 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 CDNFQ49AH0 187 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 PRR18Q8N4B5 295 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ZFP62Q8NB50 900 aaPredicted RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 LRRC20Q8TCA0 184 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 DOCK7Q96N67 2140 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ADGRL4Q9HBW9 690 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 CGGBP1Q9UFW8 167 aaPredicted RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 BRCA2P51587 3418 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 NRASP01111 189 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 SEMG1P04279 462 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 JUNBP17275 347 aaPredicted RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 VAMP1P23763 118 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 LIMS1P48059 325 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 LTBQ06643 244 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 MAB21L1Q13394 359 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 BCL2A1Q16548 175 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 HIKESHIQ53FT3 197 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ZNF770Q6IQ21 691 aaPredicted RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 ACBD4Q8NC06 268 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 CCDC54Q8NEL0 328 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 RTL8AQ9BWD3 113 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 RTN4RQ9BZR6 473 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 RNF32Q9H0A6 362 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ACKR4Q9NPB9 350 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ASF1BQ9NVP2 202 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 TAS2R4Q9NYW5 299 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 PKDREJQ9NTG1 2253 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ZNHIT1O43257 154 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 EPPINO95925 133 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ZNF16P17020 682 aaPredicted RBP8.95□□□□□ -0.98
SMG6-213ENST00000573166 ALOX5APP20292 161 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 RBP2P50120 134 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 TBR1Q16650 682 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 C4orf46Q504U0 113 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 CNIH2Q6PI25 160 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 BAIAP2L2Q6UXY1 529 aa8.95□□□□□ -0.98
SMG6-213ENST00000573166 ANGPTL5Q86XS5 388 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 336.3 ms