RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 STK17BO94768 372 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 DUSP1P28562 367 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 APOBEC1P41238 236 aaKnown RBP14.45□□□□□ -0.1
RAB40B-206ENST00000571995 SLC25A1P53007 311 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 LIMK1P53667 647 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 CARD18P57730 90 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 ACTBP60709 375 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 ACTG1P63261 375 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 CCDC107Q8WV48 283 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 PARP12Q9H0J9 701 aaKnown RBP14.45□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF442Q9H7R0 627 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 LUZP4Q9P127 313 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 TSPAN2O60636 221 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 RP2O75695 350 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 CSF1P09603 554 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 RABEPKQ7Z6M1 372 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 LRRTM1Q86UE6 522 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 MUC20Q8N307 709 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-206ENST00000571995 C12orf45Q8N5I9 185 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-206ENST00000571995 OR1J2Q8NGS2 313 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 UBALD1Q8TB05 177 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 HOXB13Q92826 284 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-206ENST00000571995 GFI1Q99684 422 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 GLSO94925 669 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-206ENST00000571995 SERPINA5P05154 406 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 BTG1P62324 171 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 RSU1Q15404 277 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 TAF9Q16594 264 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 C3P1Q6ZMU1 363 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 CCDC28AQ8IWP9 274 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 OR11G2Q8NGC1 345 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 ELP5Q8TE02 316 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 CNTD2Q9H8S5 307 aa14.45□□□□□ -0.1
RAB40B-206ENST00000571995 SC5DO75845 299 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 NXPH3O95157 252 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF16P17020 682 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 HRH1P35367 487 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 CD276Q5ZPR3 534 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF546Q86UE3 836 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 ASB5Q8WWX0 329 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 ZBTB8AQ96BR9 441 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF385AQ96PM9 386 aaKnown RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 TMEM59Q9BXS4 323 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 DLL4Q9NR61 685 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 PFDN2Q9UHV9 154 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 PIGLQ9Y2B2 252 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 PTPRSQ13332 1948 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 PMS2P1A4D2B8 440 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 SHISA7A6NL88 538 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 CFDP00746 253 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 DLX5P56178 289 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 KLF9Q13886 244 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 TRILQ7L0X0 811 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 INO80EQ8NBZ0 244 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 CCNL2Q96S94 520 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 STRADBQ9C0K7 418 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 DEFB127Q9H1M4 99 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 WNK2Q9Y3S1 2297 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 SPRY1O43609 319 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 NFYAP23511 347 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-206ENST00000571995 EGR3Q06889 387 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 SLC16A14Q7RTX9 510 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF100Q8IYN0 542 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 TCTE3Q8IZS6 198 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 THAP6Q8TBB0 222 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 KCNJ15Q99712 375 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 NICN1Q9BSH3 213 aa14.44□□□□□ -0.1
RAB40B-206ENST00000571995 OR7C1O76099 320 aaPredicted RBP14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ACSM4P0C7M7 580 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 EPHA4P54764 986 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 RTN4RL2Q86UN3 420 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 RNF128Q8TEB7 428 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 RAB3CQ96E17 227 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ADAT3Q96EY9 351 aaPredicted RBP14.43□□□□□ -0.1
RAB40B-206ENST00000571995 CPNE2Q96FN4 548 aaPredicted RBP14.43□□□□□ -0.1
RAB40B-206ENST00000571995 MAP6Q96JE9 813 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF416Q9BWM5 594 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 LOXL2Q9Y4K0 774 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 R4GMQ9 66 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF250P15622 560 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 RPA2P15927 270 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 CD53P19397 219 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 GALNSP34059 522 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 CASRP41180 1078 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 IL10RAQ13651 578 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ABCA11PQ4W5N1 156 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ZNF767PQ75MW2 155 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ADGRE4PQ86SQ3 457 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 APCDD1LQ8NCL9 501 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 CRLF2Q9HC73 371 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 EHFQ9NZC4 300 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 KCNN3Q9UGI6 736 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 CER1O95813 267 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 ACHEP22303 614 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 MAP2K6P52564 334 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 EMC4Q5J8M3 183 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 PAPOLGQ9BWT3 736 aaKnown RBP14.43□□□□□ -0.1
RAB40B-206ENST00000571995 TMPRSS13Q9BYE2 586 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 MED13Q9UHV7 2174 aa14.43□□□□□ -0.1
RAB40B-206ENST00000571995 KANTRA0A1W2PQU2 76 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms