RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 LCKP06239 509 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 H2BFMP0C1H6 154 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 ACSM4P0C7M7 580 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 HSD11B1P28845 292 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 THBS4P35443 961 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 OPRL1P41146 370 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 WNT5AP41221 380 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 RAB40BQ12829 278 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 ADIPOQQ15848 244 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 ZNF718Q3SXZ3 478 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 KLHL22Q53GT1 634 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 THAP5Q7Z6K1 395 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 OR1J1Q8NGS3 322 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 ABHD4Q8TB40 342 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 ITFG2Q969R8 447 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 Q96MF0 132 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 CCL19Q99731 98 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 C1QTNF5Q9BXJ0 243 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 PLK3Q9H4B4 646 aa17.7■□□□□ 0.42
VPS53-210ENST00000571456 CGGBP1Q9UFW8 167 aaPredicted RBP17.7■□□□□ 0.42
VPS53-210ENST00000571456 ACOD1A6NK06 481 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 F5H5K5 113 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 MRPL3P09001 348 aaKnown RBP17.69■□□□□ 0.42
VPS53-210ENST00000571456 OR4A8P0C604 315 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 FAM157BP0CG42 384 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 DBTP11182 482 aaKnown RBP17.69■□□□□ 0.42
VPS53-210ENST00000571456 ZNF250P15622 560 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 GCH1P30793 250 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 PPP1CBP62140 327 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 SNRPD2P62316 118 aaKnown RBP17.69■□□□□ 0.42
VPS53-210ENST00000571456 CSNK2BP67870 215 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 IZUMO2Q6UXV1 221 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 KRT77Q7Z794 578 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 ZNF679Q8IYX0 411 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 ZNF101Q8IZC7 436 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 IGFBPL1Q8WX77 278 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 RNFT2Q96EX2 444 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 TRAF4Q9BUZ4 470 aaPredicted RBP17.69■□□□□ 0.42
VPS53-210ENST00000571456 OPA3Q9H6K4 179 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 INPP5EQ9NRR6 644 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 SLCO1C1Q9NYB5 712 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 EXOGQ9Y2C4 368 aaKnown RBP17.69■□□□□ 0.42
VPS53-210ENST00000571456 PMF1-BGLAPU3KQ54 211 aa17.69■□□□□ 0.42
VPS53-210ENST00000571456 IGLV3-9A0A075B6K5 115 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 PSKH1P11801 424 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 PAX1P15863 534 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 LIPAP38571 399 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 KLF3P57682 345 aaPredicted RBP17.68■□□□□ 0.42
VPS53-210ENST00000571456 ZNF91Q05481 1191 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 MALLQ13021 153 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 RSPO1Q2MKA7 263 aaPredicted RBP17.68■□□□□ 0.42
VPS53-210ENST00000571456 MBNL2Q5VZF2 373 aaKnown RBP17.68■□□□□ 0.42
VPS53-210ENST00000571456 VHLLQ6RSH7 139 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 ZNF322Q6U7Q0 402 aaPredicted RBP17.68■□□□□ 0.42
VPS53-210ENST00000571456 OR52H1Q8NGJ2 320 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 SYNPRQ8TBG9 265 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 APH1BQ8WW43 257 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 OR8B4Q96RC9 309 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 DOK1Q99704 481 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 RAB26Q9ULW5 256 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 LAMP3Q9UQV4 416 aa17.68■□□□□ 0.42
VPS53-210ENST00000571456 CUBNO60494 3623 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 WBP4O75554 376 aaKnown RBP17.67■□□□□ 0.42
VPS53-210ENST00000571456 SULT1C4O75897 302 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 MT-ND5P03915 603 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 DBHP09172 617 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 SLC6A9P48067 706 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 CXCR4P61073 352 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 SWI5Q1ZZU3 235 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 PLEKHG7Q6ZR37 379 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 RFPL4BQ6ZWI9 263 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 KCTD20Q7Z5Y7 419 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 LRRC75A-AS1Q8N1F1 130 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 ZNF283Q8N7M2 679 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 FBLIM1Q8WUP2 373 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 SLC7A6Q92536 515 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 MARS2Q96GW9 593 aaKnown RBP17.67■□□□□ 0.42
VPS53-210ENST00000571456 ANKRD60Q9BZ19 345 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 ZNF391Q9UJN7 358 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 ARFGEF3Q5TH69 2177 aa17.67■□□□□ 0.42
VPS53-210ENST00000571456 GPRIN2O60269 458 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 CLIC3O95833 236 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 IGHV3-13P01766 116 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 LCATP04180 440 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 SOD3P08294 240 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 RAC2P15153 192 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 CFL1P23528 166 aaKnown RBP17.66■□□□□ 0.42
VPS53-210ENST00000571456 RIDAP52758 137 aaKnown RBP17.66■□□□□ 0.42
VPS53-210ENST00000571456 PSMA6P60900 246 aaKnown RBP17.66■□□□□ 0.42
VPS53-210ENST00000571456 SNCBQ16143 134 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 ZNF829Q3KNS6 432 aaPredicted RBP17.66■□□□□ 0.42
VPS53-210ENST00000571456 ZMAT1Q5H9K5 638 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 C11orf71Q6IPW1 123 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 PRSS57Q6UWY2 283 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 FBXW12Q6X9E4 464 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 ACBD7Q8N6N7 88 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 OR10H4Q8NGA5 316 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 SLC25A40Q8TBP6 338 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 HAVCR2Q8TDQ0 301 aa17.66■□□□□ 0.42
VPS53-210ENST00000571456 TRMT61AQ96FX7 289 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms