RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PIGCQ92535 297 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 OPN4Q9UHM6 478 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 BPTFQ12830 3046 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 STMND1H3BQB6 276 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 HOXB9P17482 250 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 OR2W3Q7Z3T1 314 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 SFTPA1Q8IWL2 248 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 SLC30A7Q8NEW0 376 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 HGDQ93099 445 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 ASH2LQ9UBL3 628 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 NDRG3Q9UGV2 375 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 MCTS1Q9ULC4 181 aaKnown RBP10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 IGHV3-20A0A0C4DH32 117 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 TBPP20226 339 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 RAB5CP51148 216 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZNF136P52737 540 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 MPPED2Q15777 294 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 VWA2Q5GFL6 755 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 HSD17B13Q7Z5P4 300 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 PRELID3BQ9Y3B1 194 aa10.05□□□□□ -0.8
PCDHGA4-201ENST00000571252 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 PRSS44E7EML9 344 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 LILRB5O75023 590 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 JTBO76095 146 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 GPANK1O95872 356 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 IRF2P14316 349 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 FAM53BQ14153 422 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 PHLDA2Q53GA4 152 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 C19orf48Q6RUI8 117 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ETFBKMTQ8IXQ9 262 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 MRGPRX1Q96LB2 322 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 PHF7Q9BWX1 381 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 CDH20Q9HBT6 801 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 SLC5A6Q9Y289 635 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 CENPVL1A0A0U1RR11 272 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 SHOXO15266 292 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 IGHEP01854 428 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ICAM2P13598 275 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 Q6ZRG5 221 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 SPRED2Q7Z698 418 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZNF223Q9UK11 482 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 TAAR5O14804 337 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZNF354AO60765 605 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 RPL23AP62750 156 aaKnown RBP10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 PLCXD3Q63HM9 321 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 MOB3CQ70IA8 216 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZAR1Q86SH2 424 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 FBXW5Q969U6 566 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ARL5BQ96KC2 179 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 ENY2Q9NPA8 101 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 CHST11Q9NPF2 352 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 SLC17A5Q9NRA2 495 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 MRM2Q9UI43 246 aaKnown RBP10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 LRP12Q9Y561 859 aa10.04□□□□□ -0.8
PCDHGA4-201ENST00000571252 MSTNO14793 375 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 BET1O15155 118 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 YKT6O15498 198 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 PHF1O43189 567 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 CBX7O95931 251 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 WNT11O96014 354 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 SCAND1P57086 179 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 MRPL21Q7Z2W9 205 aaKnown RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 PLPP5Q8NEB5 264 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 OR9K2Q8NGE7 335 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 OR52H1Q8NGJ2 320 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 TERB2Q8NHR7 220 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 MOGAT1Q96PD6 335 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 GPR84Q9NQS5 396 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZNF44P15621 663 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 FCGR2CP31995 323 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 EIF2S3P41091 472 aaKnown RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 PRR18Q8N4B5 295 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 FAM181AQ8N9Y4 354 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 NPEPL1Q8NDH3 523 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 SECTM1Q8WVN6 248 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 HAS2Q92819 552 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 NUDT9Q9BW91 350 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 PURGQ9UJV8 347 aaKnown RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 LAMA2P24043 3122 aaKnown RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 CD300LBA8K4G0 201 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 ZGLP1P0C6A0 271 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 OR13C7P0DN81 318 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 FUT5Q11128 374 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 B3GNTL1Q67FW5 361 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 DOK3Q7L591 496 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 THSD7BQ9C0I4 1608 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 TMEM272A0A1B0GTI8 110 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 NME2P1O60361 137 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 RPL12P30050 165 aaKnown RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 APOBEC1P41238 236 aaKnown RBP10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 HTR5AP47898 357 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 PPP1R1AQ13522 171 aa10.03□□□□□ -0.8
PCDHGA4-201ENST00000571252 DCAF12Q5T6F0 453 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms