RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NDUFA13Q9P0J0 144 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 VPREB3Q9UKI3 123 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 ZDHHC8Q9ULC8 765 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 TRAPPC4Q9Y296 219 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 A0A1W2PRX2 142 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 BTBD17A6NE02 478 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 G3V2T6 193 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 AP3D1O14617 1153 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 PTP4A3O75365 173 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ABHD16AO95870 558 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 IFNA14P01570 189 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 IFNW1P05000 195 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 MED14OSP0DP75 135 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 UBL4AP11441 157 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 RAC2P15153 192 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ZNF250P15622 560 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 EFNA1P20827 205 aaPredicted RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 NTSP30990 170 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 APOBEC1P41238 236 aaKnown RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 ERVS71-1P61550 626 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 POU6F2P78424 691 aaPredicted RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 KCNJ10P78508 379 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 CDK6Q00534 326 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 LAPTM4AQ15012 233 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ZMYND11Q15326 602 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 MAPK11Q15759 364 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 OR2T5Q6IEZ7 315 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 CDC73Q6P1J9 531 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 TBPL2Q6SJ96 375 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 SZRD1Q7Z422 152 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 TSEN54Q7Z6J9 526 aaKnown RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 COMTD1Q86VU5 262 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ZDHHC13Q8IUH4 622 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ZDHHC21Q8IVQ6 265 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 CCDC36Q8IYA8 594 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 RPP25LQ8N5L8 163 aaKnown RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 TMEM99Q8N816 258 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 CPEB3Q8NE35 698 aaKnown RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 OR2T29Q8NH02 315 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 DPF1Q92782 380 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 MOAP1Q96BY2 351 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 RNF125Q96EQ8 232 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ZNF75AQ96N20 296 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 SF3B5Q9BWJ5 86 aaKnown RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 C1orf43Q9BWL3 253 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 EGLN1Q9GZT9 426 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 OR51B6Q9H340 312 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 EDA2RQ9HAV5 297 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 INPP5EQ9NRR6 644 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 TMEM140Q9NV12 185 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 ADPRHL2Q9NX46 363 aa5.68□□□□□ -1.5
CHD3-213ENST00000571249 FAF1Q9UNN5 650 aaPredicted RBP5.68□□□□□ -1.5
CHD3-213ENST00000571249 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 IGHV1-69DA0A0B4J2H0 117 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 SMIM31A0A1B0GVY4 71 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CEACAM18A8MTB9 384 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 RPL36A-HNRNPH2H7BZ11 118 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 P2RY10O00398 339 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 AKR7A3O95154 331 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 DUS4LO95620 317 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 LHBP01229 141 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 MT-ND1P03886 318 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 FABP3P05413 133 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 TFAP2AP05549 437 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 LCKP06239 509 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 TFPTP0C1Z6 253 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ETFAP13804 333 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 FKBP2P26885 142 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 ADMP35318 185 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ARL3P36405 182 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CFHR2P36980 270 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 KIR2DS4P43632 304 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 RPL5P46777 297 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 CCT3P49368 545 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 HMGA2P52926 109 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ATP12AP54707 1039 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CTXN1P60606 82 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 DSTNP60981 165 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 BTG1P62324 171 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 HSPB3Q12988 150 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 IL18R1Q13478 541 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 SCARB2Q14108 478 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 MOGQ16653 247 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CEACAM16Q2WEN9 425 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 LRRC23Q53EV4 343 aaPredicted RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 C19orf54Q5BKX5 351 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 TTC23Q5W5X9 447 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CD276Q5ZPR3 534 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 AP1ARQ63HQ0 302 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 KDM4DQ6B0I6 523 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 REEP3Q6NUK4 255 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ZNF774Q6NX45 483 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 C6orf120Q7Z4R8 191 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 TMEM179BQ7Z7N9 219 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 SATL1Q86VE3 508 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 RNF130Q86XS8 419 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 SPERTQ8NA61 448 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 SCCPDHQ8NBX0 429 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms