RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 GATSQ8NAP1 163 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 SECTM1Q8WVN6 248 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 METTL21AQ8WXB1 218 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 FAM3CQ92520 227 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 C2orf50Q96LR7 162 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 NUDT16L1Q9BRJ7 211 aaKnown RBP13.79□□□□□ -0.2
SMG6-207ENST00000570756 METTL8Q9H825 291 aaKnown RBP13.79□□□□□ -0.2
SMG6-207ENST00000570756 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 THAP10Q9P2Z0 257 aaPredicted RBP13.79□□□□□ -0.2
SMG6-207ENST00000570756 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
SMG6-207ENST00000570756 R4GMQ9 66 aa13.79□□□□□ -0.2
SMG6-207ENST00000570756 LOC107986453A0A1B0GWG9 222 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 A0A1W2PP55 124 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 A0A1W2PPH5 198 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 WIPF3A6NGB9 483 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 HIDE1A8MVS5 230 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 ADAP1O75689 374 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 BPNT1O95861 308 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 ISG15P05161 165 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 CT45A8P0DMV1 189 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 CT45A9P0DMV2 189 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 IGFALSP35858 605 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 BTG2P78543 158 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 BIKQ13323 160 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 CT45A2Q5DJT8 189 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 CLEC18BQ6UXF7 455 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 VITQ6UXI7 678 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 KDM8Q8N371 416 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 ARRDC1Q8N5I2 433 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 C8orf44Q96CB5 159 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
SMG6-207ENST00000570756 MAP3K3Q99759 626 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 SERGEFQ9UGK8 458 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 PRSS38A1L453 326 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 PRSS37A4D1T9 235 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 OTOL1A6NHN0 477 aaPredicted RBP13.78□□□□□ -0.2
SMG6-207ENST00000570756 M0R036 132 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
SMG6-207ENST00000570756 ADH1BP00325 375 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 ST6GAL1P15907 406 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 VIPR2P41587 438 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 SLC9A3R2Q15599 337 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 OR2B11Q5JQS5 317 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 LYPD6Q86Y78 171 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 FRMD1Q8N878 549 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 ABHD6Q9BV23 337 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 S1PR5Q9H228 398 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 CNTD2Q9H8S5 307 aa13.78□□□□□ -0.2
SMG6-207ENST00000570756 HRKO00198 91 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 JTBO76095 146 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 PLGP00747 810 aaPredicted RBP13.77□□□□□ -0.21
SMG6-207ENST00000570756 IFNA17P01571 189 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 GNB3P16520 340 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 C5AR1P21730 350 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 ACTR1AP61163 376 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 RAB32Q13637 225 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 OTPQ5XKR4 325 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 PSRC1Q6PGN9 363 aaPredicted RBP13.77□□□□□ -0.21
SMG6-207ENST00000570756 OR52N5Q8NH56 324 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 LYPD6BQ8NI32 183 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 TAAR8Q969N4 342 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 ELF4Q99607 663 aaPredicted RBP13.77□□□□□ -0.21
SMG6-207ENST00000570756 TOLLIPQ9H0E2 274 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 SLC26A1Q9H2B4 701 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 C5orf66Q9H5L9 145 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 OPA3Q9H6K4 179 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 MRPL22Q9NWU5 206 aaKnown RBP13.77□□□□□ -0.21
SMG6-207ENST00000570756 GPR132Q9UNW8 380 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 EMC9Q9Y3B6 208 aa13.77□□□□□ -0.21
SMG6-207ENST00000570756 CEACAM18A8MTB9 384 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 SLC16A7O60669 478 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 TSPAN15O95858 294 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 GAPDHP04406 335 aaKnown RBP13.76□□□□□ -0.21
SMG6-207ENST00000570756 OR8U9P0C7N5 309 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 CD1CP29017 333 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 S100A10P60903 97 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 SKP2Q13309 424 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 RHEBQ15382 184 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 VAX1Q5SQQ9 334 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 BHLHE23Q8NDY6 225 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 OR8U1Q8NH10 309 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 OR51F2Q8NH61 342 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 ISOC2Q96AB3 205 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 RAB3CQ96E17 227 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 PFDN5Q99471 154 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 GGACTQ9BVM4 153 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 TREM2Q9NZC2 230 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 COL6A3P12111 3177 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 TRBV23OR9-2A0A075B6M9 112 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 hCG_1809904A0A1W2PP81 198 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 A0A1W2PR64 198 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 A0A1W2PRV1 198 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 UNC119Q13432 240 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 PDGFRLQ15198 375 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 TMEM268Q5VZI3 342 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 POC1AQ8NBT0 407 aa13.76□□□□□ -0.21
SMG6-207ENST00000570756 OR1J1Q8NGS3 322 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms