RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 LRRC74AQ0VAA2 488 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 IKZF1Q13422 519 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 GK2Q14410 553 aaPredicted RBP5.78□□□□□ -1.48
SMG6-205ENST00000570659 PCK2Q16822 640 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 KRTAP27-1Q3LI81 207 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 BEND6Q5SZJ8 279 aaPredicted RBP5.78□□□□□ -1.48
SMG6-205ENST00000570659 CD276Q5ZPR3 534 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 ZNF613Q6PF04 617 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 CORO6Q6QEF8 472 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 ZER1Q7Z7L7 766 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 FUNDC1Q8IVP5 155 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 SLC30A8Q8IWU4 369 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 MRPL41Q8IXM3 137 aaKnown RBP5.78□□□□□ -1.48
SMG6-205ENST00000570659 C11orf42Q8N5U0 333 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 OR5R1Q8NH85 324 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 OR1F12Q8NHA8 337 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 SLC7A13Q8TCU3 470 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 LRRC8CQ8TDW0 803 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 TFAP2CQ92754 450 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 MYDGFQ969H8 173 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 TAMM41Q96BW9 452 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 ZNF582Q96NG8 517 aaPredicted RBP5.78□□□□□ -1.48
SMG6-205ENST00000570659 DUX3Q96PT4 197 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 OR52B2Q96RD2 323 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 FGF23Q9GZV9 251 aaPredicted RBP5.78□□□□□ -1.48
SMG6-205ENST00000570659 TXNIPQ9H3M7 391 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 RANBP3Q9H6Z4 567 aaPredicted RBP5.78□□□□□ -1.48
SMG6-205ENST00000570659 C1orf123Q9NWV4 160 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 RNF7Q9UBF6 113 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 HAO1Q9UJM8 370 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 PRDM4Q9UKN5 801 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 ADAM18Q9Y3Q7 739 aa5.78□□□□□ -1.48
SMG6-205ENST00000570659 TRAV27A0A087WT01 109 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 A0A1W2PRG6 482 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 TLDC2A0PJX2 215 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 A6NDX4 124 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 BTBD17A6NE02 478 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 IFNL4K9M1U5 179 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 DCTN6O00399 190 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 SYNGR1O43759 233 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 SNRNP70P08621 437 aaKnown RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 COX5BP10606 129 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 RPL14P50914 215 aaKnown RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 LUMP51884 338 aaPredicted RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 GMFBP60983 142 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 SCARB2Q14108 478 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 DGUOKQ16854 277 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 LRRC75BQ2VPJ9 315 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 SNAI3Q3KNW1 292 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 MESTQ5EB52 335 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 C6orf10Q5SRN2 563 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 GCNT6Q5T4J0 391 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 SWT1Q5T5J6 900 aaKnown RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 INTS11Q5TA45 600 aaKnown RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 TEX36Q5VZQ5 186 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 REEP3Q6NUK4 255 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 TTC33Q6PID6 262 aaPredicted RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 CFAP77Q6ZQR2 320 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 COLCA1Q6ZS62 124 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 SBSPONQ8IVN8 264 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 OR5AU1Q8NGC0 362 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 OR2AE1Q8NHA4 323 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 DCTN5Q9BTE1 182 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 MEGF9Q9H1U4 602 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 WDR13Q9H1Z4 485 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 KCNN2Q9H2S1 579 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 SNTG1Q9NSN8 517 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 TMEM100Q9NV29 134 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 NDRG4Q9ULP0 352 aaKnown RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 PRPF19Q9UMS4 504 aaKnown RBP5.77□□□□□ -1.49
SMG6-205ENST00000570659 NDUFAF1Q9Y375 327 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 RAP2CQ9Y3L5 183 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 LHFPL6Q9Y693 200 aa5.77□□□□□ -1.49
SMG6-205ENST00000570659 MEX3AA1L020 520 aaKnown RBP5.76□□□□□ -1.49
SMG6-205ENST00000570659 TRAPPC13A5PLN9 417 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 LRRC30A6NM36 301 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 CENPBD1B2RD01 187 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 SLC22A3O75751 556 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 ANP32DO95626 131 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 PAHP00439 452 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 MT-ND1P03886 318 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 GRPP07492 148 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 SLC1A6P48664 564 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 TGM4P49221 684 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 DAP3P51398 398 aaKnown RBP5.76□□□□□ -1.49
SMG6-205ENST00000570659 UBE2E1P51965 193 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 RPL27P61353 136 aaKnown RBP5.76□□□□□ -1.49
SMG6-205ENST00000570659 NCALDP61601 193 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 HIST1H3AP68431 136 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 SLC35A2P78381 396 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 HIST2H3PS2Q5TEC6 136 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 HIST2H3AQ71DI3 136 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 ARMC8Q8IUR7 673 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 MKXQ8IYA7 352 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 ALDH16A1Q8IZ83 802 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 C1orf87Q8N0U7 546 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 LINC00471Q8N535 108 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 PCYOX1LQ8NBM8 494 aa5.76□□□□□ -1.49
SMG6-205ENST00000570659 OR13C2Q8NGS9 318 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms