RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MFAP5Q13361 173 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 TMED1Q13445 227 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 RBMS2Q15434 407 aaKnown RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 ZBED5Q49AG3 693 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 C3orf33Q6P1S2 294 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 ARHGAP11AQ6P4F7 1023 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF773Q6PK81 442 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 OAFQ86UD1 273 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 PLCZ1Q86YW0 608 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CROCCP3Q8IVE0 287 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 LAX1Q8IWV1 398 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 MMD2Q8IY49 270 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 ENTHD1Q8IYW4 607 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 FADS6Q8N9I5 356 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 GATSQ8NAP1 163 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 OR4K17Q8NGC6 315 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 RHOXF1Q8NHV9 184 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 HIST1H2ACQ93077 130 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 MYDGFQ969H8 173 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 FAM46BQ96A09 425 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 NTNG2Q96CW9 530 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 DDIT4LQ96D03 193 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 SH3YL1Q96HL8 342 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 THOC3Q96J01 351 aaKnown RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 PLEKHA8Q96JA3 519 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 GPX7Q96SL4 187 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 ADNPQ9H2P0 1102 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 RAB9BQ9NP90 201 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CLN6Q9NWW5 311 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF224Q9NZL3 707 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CNOT2Q9NZN8 540 aaKnown RBP6.18□□□□□ -1.42
CNOT1-222ENST00000570139 CHRNA9Q9UGM1 479 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 NTNG1Q9Y2I2 539 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 GPR179Q6PRD1 2367 aa6.18□□□□□ -1.42
CNOT1-222ENST00000570139 KIF26BQ2KJY2 2108 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 TMED7-TICAM2A0A0A6YYA0 188 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 EFCAB10A6NFE3 127 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 GJE1A6NN92 205 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 CDC42EP2O14613 210 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 IMPA2O14732 288 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF354AO60765 605 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 FZD7O75084 574 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 CBR3O75828 277 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 OR7A10O76100 309 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 NDUFB2O95178 105 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 AHSA1O95433 338 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 NTN1O95631 604 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 DIRAS3O95661 229 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 CLIC3O95833 236 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 IFNGP01579 166 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PIPP12273 146 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PAICSP22234 425 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 ITGA3P26006 1051 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 GTF2E2P29084 291 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 POLR2IP36954 125 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 CDKN1AP38936 164 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PTGDSP41222 190 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 GPR4P46093 362 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RPL5P46777 297 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RPS4XP62701 263 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 SLC3A1Q07837 685 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF415Q09FC8 603 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RASGEF1BQ0VAM2 473 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 Q0VFX4 171 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 SELENBP1Q13228 472 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 APOFQ13790 326 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 GINS1Q14691 196 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF74Q16587 644 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PGGHGQ32M88 737 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PLPPR5Q32ZL2 321 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 NDUFAF6Q330K2 333 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 AGAP7PQ5VUJ5 663 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 OR4A47Q6IF82 309 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 DPY19L2P2Q6ZN68 376 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 GID4Q8IVV7 300 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 NEXN-AS1Q8NBZ9 246 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 ZNF248Q8NDW4 579 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 OR1J4Q8NGS1 313 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 PFN4Q8NHR9 129 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 FGFBP3Q8TAT2 258 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 FCGR1BQ92637 280 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 GGHQ92820 318 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 AGAP4Q96P64 663 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 TUBA1CQ9BQE3 449 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 UTP23Q9BRU9 249 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 POTEKPQ9BYX7 375 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 FAM192AQ9GZU8 254 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RACGAP1Q9H0H5 632 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RBM38Q9H0Z9 239 aaKnown RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 OR52D1Q9H346 318 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 MEPEQ9NQ76 525 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 NANSQ9NR45 359 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 HIF1ANQ9NWT6 349 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 B4GALT7Q9UBV7 327 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 DAPK2Q9UIK4 370 aa6.17□□□□□ -1.42
CNOT1-222ENST00000570139 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 BOKQ9UMX3 212 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-222ENST00000570139 RNF6Q9Y252 685 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms