RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CD55P08174 381 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 IGHV4-31P0DP07 118 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 TNFSF4P23510 183 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 SLC15A1P46059 708 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 CHN2P52757 468 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 MALLQ13021 153 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 EIF2B1Q14232 305 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 HFEQ30201 348 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 OR2T2Q6IF00 324 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 ZFP1Q6P2D0 407 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 DRAM2Q6UX65 266 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 Q6ZR03 302 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 RHOUQ7L0Q8 258 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 CXXC5Q7LFL8 322 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 TIGD4Q8IY51 512 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 ZMYND19Q96E35 227 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 ELMOD3Q96FG2 381 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 ZNF582Q96NG8 517 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 KCNJ15Q99712 375 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 COPS4Q9BT78 406 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 PRRG3Q9BZD7 231 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
HERPUD1-218ENST00000569569 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 A8MV72 311 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 SELEP16581 610 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 SLC6A9P48067 706 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 PRKXP51817 358 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 RPS7P62081 194 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 GK2Q14410 553 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 TRIP10Q15642 601 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 C6orf52Q5T4I8 152 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 OR5AS1Q8N127 324 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 OR8G5Q8NG78 346 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 OR2Z1Q8NG97 314 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 RNF133Q8WVZ7 376 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 HPS1Q92902 700 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 RAB3IPQ96QF0 476 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 ABHD6Q9BV23 337 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 OSBPL10Q9BXB5 764 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 TOR3AQ9H497 397 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 OAZ3Q9UMX2 235 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 WNK2Q9Y3S1 2297 aa11.73□□□□□ -0.53
HERPUD1-218ENST00000569569 ZAR1LA6NP61 321 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 IQCF6A8MYZ5 107 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 APOC1P02654 83 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 SLC2A5P22732 501 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 IGFBP5P24593 272 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 EPHA2P29317 976 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 APOFQ13790 326 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 SLX4IPQ5VYV7 408 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 SPATC1Q76KD6 591 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 ZNF283Q8N7M2 679 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 BBS1Q8NFJ9 593 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 OTOSQ8NHW6 89 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 CCL17Q92583 94 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 POM121Q96HA1 1249 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 TEAD3Q99594 435 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 CIB1Q99828 191 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 PKP2Q99959 881 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 RBM4BQ9BQ04 359 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 TMEFF2Q9UIK5 374 aaPredicted RBP11.72□□□□□ -0.53
HERPUD1-218ENST00000569569 SAC3D1A6NKF1 404 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 CLDN25C9JDP6 229 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 H3BNX3 289 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 PRKYO43930 277 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 SELENOFO60613 162 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 LYNP07948 512 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 HSD11B1P28845 292 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 EFNB1P98172 346 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 SLC3A1Q07837 685 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 SNAI3Q3KNW1 292 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 SPRNQ5BIV9 151 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 C12orf73Q69YU5 71 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 MRPL21Q7Z2W9 205 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 TCEANCQ8N8B7 351 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 THEM6Q8WUY1 208 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 MSI2Q96DH6 328 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 TIMD4Q96H15 378 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 REPIN1Q9BWE0 567 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 SP140LQ9H930 580 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 TMEM100Q9NV29 134 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 TREM2Q9NZC2 230 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 H2AFY2Q9P0M6 372 aaPredicted RBP11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 CACNG2Q9Y698 323 aa11.71□□□□□ -0.53
HERPUD1-218ENST00000569569 ANK3Q12955 4377 aaKnown RBP11.71□□□□□ -0.54
HERPUD1-218ENST00000569569 LOC100289279A0A1B0GTE1 492 aa11.7□□□□□ -0.54
HERPUD1-218ENST00000569569 XRCC2O43543 280 aa11.7□□□□□ -0.54
HERPUD1-218ENST00000569569 LMX1BO60663 402 aa11.7□□□□□ -0.54
HERPUD1-218ENST00000569569 TGFAP01135 160 aa11.7□□□□□ -0.54
HERPUD1-218ENST00000569569 H2BFMP0C1H6 154 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms