RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DIMT1Q9UNQ2 313 aaKnown RBP13.85□□□□□ -0.19
USB1-215ENST00000569252 ERGIC3Q9Y282 383 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 MYRFQ9Y2G1 1151 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 KLHDC2Q9Y2U9 406 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 LRP12Q9Y561 859 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 TMEM269A0A1B0GVZ9 245 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 J3QRE1 110 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 CTAG2O75638 210 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 IGHA1P01876 353 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 PSKH1P11801 424 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 GCH1P30793 250 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 DCTDP32321 178 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 FABP6P51161 128 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 SNTB2Q13425 540 aaKnown RBP13.84□□□□□ -0.19
USB1-215ENST00000569252 RGS7BPQ6MZT1 257 aaPredicted RBP13.84□□□□□ -0.19
USB1-215ENST00000569252 MYPOPQ86VE0 399 aaPredicted RBP13.84□□□□□ -0.19
USB1-215ENST00000569252 KLHL36Q8N4N3 616 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 NUP37Q8NFH4 326 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 OR10S1Q8NGN2 331 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 AKAP1Q92667 903 aaKnown RBP eCLIP13.84□□□□□ -0.19
USB1-215ENST00000569252 PGAM5Q96HS1 289 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 OR10A2Q9H208 303 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 BRD7Q9NPI1 651 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 ERVK13-1Q9NX77 482 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 GTF2A1LQ9UNN4 478 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 CMAHPQ9Y471 501 aa13.84□□□□□ -0.19
USB1-215ENST00000569252 ACOD1A6NK06 481 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 J3QW42 95 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 MYL12BO14950 172 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 TBX1O43435 398 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 RGS10O43665 173 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 RPP14O95059 124 aaKnown RBP13.83□□□□□ -0.2
USB1-215ENST00000569252 ATE1O95260 518 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 ACSM4P0C7M7 580 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 GLRXP35754 106 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 GBX2P52951 348 aaPredicted RBP13.83□□□□□ -0.2
USB1-215ENST00000569252 ZNF85Q03923 595 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 SPOCK1Q08629 439 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 MRPL28Q13084 256 aaKnown RBP13.83□□□□□ -0.2
USB1-215ENST00000569252 MOGQ16653 247 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 ZNF718Q3SXZ3 478 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
USB1-215ENST00000569252 LAIR2Q6ISS4 152 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 FBXL14Q8N1E6 418 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 PAQR4Q8N4S7 273 aaPredicted RBP13.83□□□□□ -0.2
USB1-215ENST00000569252 KBTBD8Q8NFY9 601 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 OR52H1Q8NGJ2 320 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 HAVCR2Q8TDQ0 301 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 DOK1Q99704 481 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 UBAP1Q9NZ09 502 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 SNX5Q9Y5X3 404 aa13.83□□□□□ -0.2
USB1-215ENST00000569252 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 SIAH2O43255 324 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 PLAUP00749 431 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 MT-ND5P03915 603 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 CDK1P06493 297 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 BMP4P12644 408 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 CRHBPP24387 322 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 APOBEC3AP31941 199 aaPredicted RBP13.82□□□□□ -0.2
USB1-215ENST00000569252 ZNF121P58317 390 aaPredicted RBP13.82□□□□□ -0.2
USB1-215ENST00000569252 PPP1CBP62140 327 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 HGFACQ04756 655 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 TIGD6Q17RP2 521 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 CDONQ4KMG0 1287 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 TP53I3Q53FA7 332 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 FBXW5Q969U6 566 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 C4orf36Q96KX1 117 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 HS3ST6Q96QI5 342 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 DHRS9Q9BPW9 319 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 JAM3Q9BX67 310 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 C1QTNF5Q9BXJ0 243 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 UBTD1Q9HAC8 227 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 CA10Q9NS85 328 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 MRM2Q9UI43 246 aaKnown RBP13.82□□□□□ -0.2
USB1-215ENST00000569252 GPR160Q9UJ42 338 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 LRCH1Q9Y2L9 728 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 CAB39Q9Y376 341 aaPredicted RBP13.82□□□□□ -0.2
USB1-215ENST00000569252 PCDHGB5Q9Y5G0 923 aa13.82□□□□□ -0.2
USB1-215ENST00000569252 FBN3Q75N90 2809 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 JMJD1CQ15652 2540 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 FAM221AA4D161 298 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 LOC110117498-PIK3R3F6TDL0 507 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 MAGEB4O15481 346 aaPredicted RBP13.81□□□□□ -0.2
USB1-215ENST00000569252 SMPD2O60906 423 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 CFL1P23528 166 aaKnown RBP13.81□□□□□ -0.2
USB1-215ENST00000569252 THBS4P35443 961 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 WNT5AP41221 380 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 ETV1P50549 477 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 OR12D2P58182 307 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 RSPO1Q2MKA7 263 aaPredicted RBP13.81□□□□□ -0.2
USB1-215ENST00000569252 KRTAP27-1Q3LI81 207 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 LIPNQ5VXI9 398 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 FAM57BQ71RH2 274 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 SSX6Q7RTT6 188 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 NAA40Q86UY6 237 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 SYS1Q8N2H4 156 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 SYNPRQ8TBG9 265 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
USB1-215ENST00000569252 CXXC4Q9H2H0 198 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms