RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 HOXA6P31267 233 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 CNN1P51911 297 aaKnown RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 CTSCP53634 463 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 DSC1Q08554 894 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF79Q15937 498 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 DEFB134Q4QY38 66 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF362Q5T0B9 420 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 SLC48A1Q6P1K1 146 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 Q6ZVU0 165 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 TMEM179BQ7Z7N9 219 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF547Q8IVP9 402 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 TMEM99Q8N816 258 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 RTN4IP1Q8WWV3 396 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OR2A7Q96R45 310 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 TRIB1Q96RU8 372 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 C11orf84Q9BUA3 381 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 TRAV27A0A087WT01 109 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 A0A087WWC5 75 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 VAMP5O95183 116 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 NTF3P20783 257 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 IL2RGP31785 369 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ERVFRD-1P60508 538 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 IFITM3Q01628 133 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 B3GAT1Q9P2W7 334 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 HSPB8Q9UJY1 196 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 A0A087WV62 115 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 A0A0D9SEW6 157 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ADH4P08319 380 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 HNRNPA2B1P22626 353 aaKnown RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 KLF3P57682 345 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 GPR32P1Q8NGA4 272 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OR11H7Q8NGC8 314 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OR4A16Q8NH70 328 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 IL17BQ9UHF5 180 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 UPK1AO00322 258 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OGG1O15527 345 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ADAMTS4O75173 837 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 WNT11O96014 354 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 LCATP04180 440 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 BRS3P32247 399 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ARR3P36575 388 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 GPR12P47775 334 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 AMTP48728 403 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 GPM6BQ13491 265 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 RPEL1Q2QD12 228 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 MDGA1Q8NFP4 955 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 PRSS50Q9UI38 385 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 A4GNTQ9UNA3 340 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 AKAP12Q02952 1782 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OMGP23515 440 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 THEM4Q5T1C6 240 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 NCMAPQ5T1S8 102 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 PSRC1Q6PGN9 363 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 FIGLAQ6QHK4 219 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 ASB5Q8WWX0 329 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 TMEM37Q8WXS4 190 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 SLC46A2Q9BY10 475 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 SEMA6CQ9H3T2 930 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 FAM206AQ9NX38 181 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 MMACHCQ9Y4U1 282 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 SIRPB1O00241 398 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 SLC35E2P0CK97 266 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 MPGP29372 298 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 RPL27P61353 136 aaKnown RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 SERF2P84101 59 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 MFAP5Q13361 173 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 LRRTM3Q86VH5 581 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 TMEM123Q8N131 208 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 PNPLA1Q8N8W4 532 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OR4S1Q8NGB4 309 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 OR1P1Q8NH06 330 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 UBE2FQ969M7 185 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 GGACTQ9BVM4 153 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 WDR61Q9GZS3 305 aaKnown RBP6.47□□□□□ -1.37
CNOT1-216ENST00000569240 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 WIPI2Q9Y4P8 454 aa6.47□□□□□ -1.37
CNOT1-216ENST00000569240 FAM24AA6NFZ4 105 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 DNPH1O43598 174 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 OR5G3P0C626 314 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 HIST1H1BP16401 226 aaKnown RBP6.46□□□□□ -1.37
CNOT1-216ENST00000569240 CSN1S1P47710 185 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 BIDP55957 195 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 CXCL17Q6UXB2 119 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 TGIF2LYQ8IUE0 185 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 GJC3Q8NFK1 279 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 TM4SF18Q96CE8 201 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 SLC35A4Q96G79 324 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 TEX37Q96LM6 180 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 GLIS2Q9BZE0 524 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-216ENST00000569240 BCAS3Q9H6U6 928 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 CRYBG1Q9Y4K1 1723 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 A6NLC8 198 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 TMX2-CTNND1H3BSU7 103 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 GFYI3L273 518 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 AKR1C3P42330 323 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 ERVFC1-1P60608 527 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms