RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 GPR4P46093 362 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 COX10Q12887 443 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 RUSC1-AS1Q66K80 236 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 DMRTB1Q96MA1 342 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 TBX15Q96SF7 602 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 NUAK2Q9H093 628 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 MMADHCQ9H3L0 296 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 RERGLQ9H628 205 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 FN3KRPQ9HA64 309 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 TCF7L1Q9HCS4 588 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 ARGLU1Q9NWB6 273 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 RHCGQ9UBD6 479 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 CAB39Q9Y376 341 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 A0A0G2JND7 137 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 IGHV3-64DA0A0J9YX35 117 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 C5orf63A6NC05 138 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 LGALS8O00214 317 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 FFAR1O14842 300 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 GMDSO60547 372 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 FAM20BO75063 409 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 HLA-DPB1P04440 258 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 SFTPBP07988 381 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 IER3P46695 156 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 YAP1P46937 504 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 GK2Q14410 553 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 C2orf68Q2NKX9 166 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 KRTAP27-1Q3LI81 207 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 CYP4Z1Q86W10 505 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 ZSCAN4Q8NAM6 433 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 NPRL2Q8WTW4 380 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 C16orf95Q9H693 158 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 KRCC1Q9NPI7 259 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 SIGLEC7Q9Y286 467 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 LHFPL6Q9Y693 200 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 WNK1Q9H4A3 2382 aa13.05□□□□□ -0.32
HERPUD1-215ENST00000568676 CMYA5Q8N3K9 4069 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 J3KTA2 159 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 PTP4A3O75365 173 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 TXNDC12O95881 172 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 ZNF26P17031 533 aaPredicted RBP13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 MZT1Q08AG7 82 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 SLC36A3Q495N2 470 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 DPY19L2P2Q6ZN68 376 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 ARPINQ7Z6K5 226 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 SPERTQ8NA61 448 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 SPRYD4Q8WW59 207 aaPredicted RBP13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 SIRPDQ9H106 197 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 WDR76Q9H967 626 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 CTSZQ9UBR2 303 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 RPS6KA6Q9UK32 745 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 SNX13Q9Y5W8 968 aa13.04□□□□□ -0.32
HERPUD1-215ENST00000568676 A0A1B0GVI7 797 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 BTBD17A6NE02 478 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 SOCS2O14508 198 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 ADAM20O43506 726 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 OR8G1Q15617 311 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 TBPL2Q6SJ96 375 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 VTCN1Q7Z7D3 282 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 ATF6BQ99941 703 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 UFSP2Q9NUQ7 469 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 FAM96BQ9Y3D0 163 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 KPTNQ9Y664 436 aa13.03□□□□□ -0.32
HERPUD1-215ENST00000568676 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 OOEPA6NGQ2 149 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 IMPA2O14732 288 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 PPP1R3DO95685 299 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 IGHV4-59P01825 116 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 FUT4P22083 530 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 CENPAP49450 140 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 TPTEP56180 551 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 DGCR6Q14129 220 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 OR8B8Q15620 311 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 MPPED2Q15777 294 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 RSPO1Q2MKA7 263 aaPredicted RBP13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 PRAMEF6Q5VXH4 476 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 FKBP9P1Q75LS8 142 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 CBLL1Q75N03 491 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 GALNT4Q8N4A0 578 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC7A13Q8TCU3 470 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 LHX4Q969G2 390 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 SLCO4A1Q96BD0 722 aa13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-215ENST00000568676 PITX2Q99697 317 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms