RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 OOEPA6NGQ2 149 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 GPR37O15354 613 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 OR10H3O60404 316 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 KHDRBS3O75525 346 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 IFNA14P01570 189 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 GABRA5P31644 462 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 GZMMP51124 257 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 LOXL3P58215 753 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 MAGOHP61326 146 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 COLCA1Q6ZS62 124 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 BTN2A1Q7KYR7 527 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 FAM122BQ7Z309 247 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 GJC3Q8NFK1 279 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 NPRL2Q8WTW4 380 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 Q96M85 177 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 NDEL1Q9GZM8 345 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 SYT4Q9H2B2 425 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 RERGLQ9H628 205 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 CNTD2Q9H8S5 307 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 FBLN5Q9UBX5 448 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 A4GNTQ9UNA3 340 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 RYR3Q15413 4870 aa9.72□□□□□ -0.85
GTF3C1-209ENST00000568569 RNASEK-C17orf49H0YIS7 233 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 SLC16A7O60669 478 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 PRSS12P56730 875 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 GUCA2AQ02747 115 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 PRKCDQ05655 676 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 KRR1Q13601 381 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 GK2Q14410 553 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 OR8G1Q15617 311 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 C11orf88Q6PI97 169 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 METAP1DQ6UB28 335 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 VMO1Q7Z5L0 202 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 BOLLQ8N9W6 283 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 SPERTQ8NA61 448 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 PLPP7Q8NBV4 271 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 OR5R1Q8NH85 324 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 TSPEARQ8WU66 669 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 SPRYD4Q8WW59 207 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 SLC22A4Q9H015 551 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 SEMA6AQ9H2E6 1030 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 RASSF4Q9H2L5 321 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 NMNAT1Q9HAN9 279 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 NECAP2Q9NVZ3 263 aa9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 RPUSD1Q9UJJ7 312 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 V9GYY5 206 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 TET2Q6N021 2002 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-209ENST00000568569 DVL1O14640 695 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 PAHP00439 452 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 GYPAP02724 150 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 EEF1B2P24534 225 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 SDHAP31040 664 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 HIST1H3AP68431 136 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 MALLQ13021 153 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 KCNMB1Q16558 191 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 VAX1Q5SQQ9 334 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 HIST2H3PS2Q5TEC6 136 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 SLC35E4Q6ICL7 350 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 PGM2L1Q6PCE3 622 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 HIST2H3AQ71DI3 136 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 PGAP1Q75T13 922 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 RNF113BQ8IZP6 322 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 OFCC1Q8IZS5 231 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 SH3GL1Q99961 368 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 ADAT1Q9BUB4 502 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 PARD6BQ9BYG5 372 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 PPA2Q9H2U2 334 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 VSX1Q9NZR4 365 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 ONECUT1Q9UBC0 465 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 RPS6KA6Q9UK32 745 aa9.7□□□□□ -0.86
GTF3C1-209ENST00000568569 F5H5K5 113 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 CDC42EP2O14613 210 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 PLXNB1O43157 2135 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 XPNPEP2O43895 674 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 FCN3O75636 299 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ACSM4P0C7M7 580 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ZNF26P17031 533 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 CA6P23280 308 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 GPR4P46093 362 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 DBPQ10586 325 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 CYLC2Q14093 348 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 TRAM2Q15035 370 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 KRTAP27-1Q3LI81 207 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ZBED5Q49AG3 693 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 LRRC23Q53EV4 343 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 CYBRD1Q53TN4 286 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 OXLD1Q5BKU9 147 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 RABL3Q5HYI8 236 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 GPR139Q6DWJ6 353 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 NANOGP8Q6NSW7 305 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ERICH5Q6P6B1 374 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 CORO6Q6QEF8 472 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ZNF730Q6ZMV8 503 aa9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 MRPL21Q7Z2W9 205 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-209ENST00000568569 ADCK1Q86TW2 530 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms