RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SELEP16581 610 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 DCTDP32321 178 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 LIPAP38571 399 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 CDKN1AP38936 164 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 VHLP40337 213 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 PTH2RP49190 550 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 RIDAP52758 137 aaKnown RBP10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ROM1Q03395 351 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF91Q05481 1191 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 EGR3Q06889 387 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 RAB40BQ12829 278 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF322Q6U7Q0 402 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-208ENST00000567250 LRRN1Q6UXK5 716 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 IZUMO2Q6UXV1 221 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 COLCA1Q6ZS62 124 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 FAM220AQ7Z4H9 259 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF679Q8IYX0 411 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 OR10H4Q8NGA5 316 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 OR52H1Q8NGJ2 320 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 UBE2FQ969M7 185 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 MARS2Q96GW9 593 aaKnown RBP10.45□□□□□ -0.74
SF3B3-208ENST00000567250 OR8B4Q96RC9 309 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 RAB1BQ9H0U4 201 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 MOB1AQ9H8S9 216 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 CYSLTR2Q9NS75 346 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF701Q9NV72 531 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-208ENST00000567250 PTTG3PQ9NZH4 202 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 FZR1Q9UM11 496 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 KLHDC2Q9Y2U9 406 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 LRP12Q9Y561 859 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ARFGEF3Q5TH69 2177 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 TBX1O43435 398 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 TIMM8AO60220 97 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-208ENST00000567250 CLIC3O95833 236 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 FADS2O95864 444 aaKnown RBP10.44□□□□□ -0.74
SF3B3-208ENST00000567250 IGHV3-13P01766 116 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 RAC2P15153 192 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 CFL1P23528 166 aaKnown RBP10.44□□□□□ -0.74
SF3B3-208ENST00000567250 ART1P52961 327 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 ATP5J2P56134 94 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 ACTA2P62736 377 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 ACTG2P63267 376 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 KLHL22Q53GT1 634 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 FBXW12Q6X9E4 464 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 MRPL21Q7Z2W9 205 aaKnown RBP10.44□□□□□ -0.74
SF3B3-208ENST00000567250 APH1BQ8WW43 257 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 TFAP2CQ92754 450 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 PERPQ96FX8 193 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 AMELYQ99218 206 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 TBX5Q99593 518 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 INPP5EQ9NRR6 644 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF391Q9UJN7 358 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 COPS3Q9UNS2 423 aa10.44□□□□□ -0.74
SF3B3-208ENST00000567250 MAST4O15021 2626 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 APOL3O95236 402 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 KITLGP21583 273 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 ZNF121P58317 390 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-208ENST00000567250 ISL1P61371 349 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 MED21Q13503 144 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 TIGD6Q17RP2 521 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 MSMPQ1L6U9 139 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 RSPO1Q2MKA7 263 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-208ENST00000567250 MST1LQ2TV78 715 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 PLEKHG7Q6ZR37 379 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 USP51Q70EK9 711 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 PGAP1Q75T13 922 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 CNIH3Q8TBE1 160 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 NEU4Q8WWR8 484 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-208ENST00000567250 DIRC2Q96SL1 478 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 VRK1Q99986 396 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-208ENST00000567250 TTTY10Q9BZA0 68 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 OR10A2Q9H208 303 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 RGCCQ9H4X1 137 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 MYOZ1Q9NP98 299 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-208ENST00000567250 TAAR3PQ9P1P4 343 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 EXOGQ9Y2C4 368 aaKnown RBP10.43□□□□□ -0.74
SF3B3-208ENST00000567250 STARD10Q9Y365 291 aa10.43□□□□□ -0.74
SF3B3-208ENST00000567250 A0A1W2PQL4 384 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-208ENST00000567250 TMEM129A0AVI4 362 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 DAPL1A0PJW8 107 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 ACOD1A6NK06 481 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 WBP4O75554 376 aaKnown RBP10.42□□□□□ -0.74
SF3B3-208ENST00000567250 SULT1C4O75897 302 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 CLPTM1O96005 669 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 SLC2A1P11166 492 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 MPV17P39210 176 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 ALDH3B1P43353 468 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 HCCSP53701 268 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 SNCBQ16143 134 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 PCGF3Q3KNV8 242 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 SNAI3Q3KNW1 292 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 Q5PR19 223 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 C6orf52Q5T4I8 152 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 SHEQ5VZ18 495 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 FAM57BQ71RH2 274 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 THAP5Q7Z6K1 395 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 LRP11Q86VZ4 500 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 FTMTQ8N4E7 242 aa10.42□□□□□ -0.74
SF3B3-208ENST00000567250 RFLNBQ8N5W9 214 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms