RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SLC36A3Q495N2 470 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 TMEM155Q4W5P6 130 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 NIPAL3Q6P499 406 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 C5orf46Q6UWT4 87 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 TMPRSS11FQ6ZWK6 438 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 NANOGNBQ7Z5D8 188 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 IQCF1Q8N6M8 205 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 OR51A7Q8NH64 312 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 RAB40AQ8WXH6 277 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 DNAJC9Q8WXX5 260 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 C11orf40Q8WZ69 217 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 DCLRE1CQ96SD1 692 aaKnown RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF184Q99676 751 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 ADI1Q9BV57 179 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 SSBP3Q9BWW4 388 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-216ENST00000567071 GABARAPL3Q9BY60 117 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 CNTD2Q9H8S5 307 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 NANSQ9NR45 359 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 TBC1D23Q9NUY8 699 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 PRDM4Q9UKN5 801 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 FBXL3Q9UKT7 428 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 CDH10Q9Y6N8 788 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 TANC2Q9HCD6 1990 aa8.08□□□□□ -1.12
CAPN3-216ENST00000567071 LIPT2A6NK58 231 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 FTCDNL1E5RQL4 147 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 M0R082 166 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 AKR7A3O95154 331 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 DUS4LO95620 317 aaKnown RBP8.07□□□□□ -1.12
CAPN3-216ENST00000567071 RAB36O95755 333 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 CLPTM1O96005 669 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 IGHV2-70P01814 119 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ASAH2BP0C7U1 165 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 OR8G3PP0DMU2 310 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 OSMP13725 252 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 IER3P46695 156 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 SELENOPP49908 381 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF81P51508 661 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 MAP2K6P52564 334 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 RFX4Q33E94 735 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 CLEC12AQ5QGZ9 265 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 FAM69AQ5T7M9 428 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 TMEM225Q6GV28 225 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 RASSF6Q6ZTQ3 369 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 OAFQ86UD1 273 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 IGFN1Q86VF2 1251 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 LDLRAD3Q86YD5 345 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 LYG1Q8N1E2 194 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 KLHDC1Q8N7A1 406 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ZIC4Q8N9L1 334 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 MOSPD2Q8NHP6 518 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF417Q8TAU3 575 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 TEX47Q8TBZ9 253 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 PLEKHA8Q96JA3 519 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 SAMD8Q96LT4 415 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF587Q96SQ5 575 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-216ENST00000567071 TAPBPLQ9BX59 468 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ASPNQ9BXN1 380 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 GPR61Q9BZJ8 451 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 LINC00470Q9BZP3 86 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 OR52D1Q9H346 318 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ACOXLQ9NUZ1 547 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF229Q9UJW7 825 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 FOXJ3Q9UPW0 622 aa8.07□□□□□ -1.12
CAPN3-216ENST00000567071 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 IGLV3-9A0A075B6K5 115 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 PLSCR5A0PG75 271 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 C11orf98E9PRG8 122 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 RNASEK-C17orf49H0YIS7 233 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 H0YJX3 145 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 BLOC1S5-TXNDC5H3BN57 136 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 RPL36A-HNRNPH2H7BZ11 118 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 M0R129 80 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 OR2T1O43869 369 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 UPK3AO75631 287 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 SERPINI2O75830 405 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 JTBO76095 146 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 CLIC3O95833 236 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 MT-ATP6P00846 226 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 IGF2P01344 180 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 HIST1H2ABP04908 130 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 LCKP06239 509 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 ZNF14P17017 642 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-216ENST00000567071 CPT2P23786 658 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 CAPGP40121 348 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 AQP2P41181 271 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 SLC9A3P48764 834 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 CRISP1P54107 249 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 FXYD6P3P58550 94 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 RPL18Q07020 188 aaKnown RBP8.06□□□□□ -1.12
CAPN3-216ENST00000567071 COX10Q12887 443 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 PMS2P3Q13401 168 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 FHL1Q13642 323 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 ZBED5Q49AG3 693 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 ZBTB37Q5TC79 503 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 TMEM236Q5W0B7 351 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 SMARCD3Q6STE5 483 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 CD300LDQ6UXZ3 194 aa8.06□□□□□ -1.12
CAPN3-216ENST00000567071 HIST3H2AQ7L7L0 130 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms