RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 SDR9C7Q8NEX9 313 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 OR10AD1Q8NGE0 317 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 OR2AJ1Q8NGZ0 328 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 PITX2Q99697 317 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 SLC6A7Q99884 636 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 BTBD10Q9BSF8 475 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 THTPAQ9BU02 230 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 RBM4Q9BWF3 364 aaKnown RBP11.96□□□□□ -0.49
COMMD4-216ENST00000567023 HCAR1Q9BXC0 346 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 TMEM165Q9HC07 324 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 TMEM100Q9NV29 134 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 MRPL22Q9NWU5 206 aaKnown RBP11.96□□□□□ -0.49
COMMD4-216ENST00000567023 INSIG2Q9Y5U4 225 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 LYVE1Q9Y5Y7 322 aa11.96□□□□□ -0.49
COMMD4-216ENST00000567023 CEACAM18A8MTB9 384 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 F5H5K5 113 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 H0YL77 283 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 GYG2O15488 501 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 RGS9O75916 674 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-216ENST00000567023 CFPP27918 469 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.95□□□□□ -0.5
COMMD4-216ENST00000567023 TRAP1Q12931 704 aaKnown RBP11.95□□□□□ -0.5
COMMD4-216ENST00000567023 ESCO2Q56NI9 601 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 SLC35F1Q5T1Q4 408 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 NAA40Q86UY6 237 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 LINC00346Q8IVM7 164 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF420Q8TAQ5 688 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-216ENST00000567023 ERGIC1Q969X5 290 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 MAP6Q96JE9 813 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 MAGIXQ9H6Y5 334 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 EGLN3Q9H6Z9 239 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 WDR76Q9H967 626 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 DDX28Q9NUL7 540 aaKnown RBP11.95□□□□□ -0.5
COMMD4-216ENST00000567023 LRCH1Q9Y2L9 728 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 AUP1Q9Y679 476 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 CDH10Q9Y6N8 788 aa11.95□□□□□ -0.5
COMMD4-216ENST00000567023 TNFRSF11BO00300 401 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 GASTP01350 101 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 HLA-DQA2P01906 255 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 PPIAL4GP0DN37 164 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF823P16415 610 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 OTX1P32242 354 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-216ENST00000567023 TPTEP56180 551 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 PAX2Q02962 417 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 PAX8Q06710 450 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 MALLQ13021 153 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 MAB21L1Q13394 359 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 CLEC12AQ5QGZ9 265 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 RASSF6Q6ZTQ3 369 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 BHLHE23Q8NDY6 225 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 OR9Q2Q8NGE9 314 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 OR52L1Q8NGH7 329 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 OR4C15Q8NGM1 316 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 OR10S1Q8NGN2 331 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 OR2T4Q8NH00 348 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 Q8TCH9 128 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 CCDC124Q96CT7 223 aaKnown RBP11.94□□□□□ -0.5
COMMD4-216ENST00000567023 FN3KQ9H479 309 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 MIOXQ9UGB7 285 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 NUP50Q9UKX7 468 aa11.94□□□□□ -0.5
COMMD4-216ENST00000567023 AQP12BA6NM10 295 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 LRRC30A6NM36 301 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 F5H5P2 479 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 M0R135 149 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 DNAJC8O75937 253 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 LCATP04180 440 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 HLA-DPB1P04440 258 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 PMELP40967 661 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 CD200P41217 278 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 ACTG1P63261 375 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 PCK2Q16822 640 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF404Q494X3 552 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 KLF17Q5JT82 389 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 PGAP1Q75T13 922 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 MOGAT3Q86VF5 341 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 AQP12AQ8IXF9 295 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 C1orf87Q8N0U7 546 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 LNX2Q8N448 690 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 ZNRF4Q8WWF5 429 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 GCDHQ92947 438 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 SPTSSAQ969W0 71 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 DACT3Q96B18 629 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 SLCO4A1Q96BD0 722 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 MRI1Q9BV20 369 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 SSBP3Q9BWW4 388 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
COMMD4-216ENST00000567023 PLA2G12AQ9BZM1 189 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 SLC22A4Q9H015 551 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 OR5V1Q9UGF6 321 aa11.93□□□□□ -0.5
COMMD4-216ENST00000567023 GSC2O15499 205 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 ATP5HO75947 161 aa11.92□□□□□ -0.5
COMMD4-216ENST00000567023 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
COMMD4-216ENST00000567023 CD80P33681 288 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms