RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 OR52D1Q9H346 318 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 PRDM13Q9H4Q3 707 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 CYB5R1Q9UHQ9 305 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 F5H5K5 113 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 PHYHO14832 338 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 DIRAS1O95057 198 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 ZNF205O95201 554 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 IGHV4-38-2P0DP08 117 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 HIST1H1CP16403 213 aaKnown RBP12.52□□□□□ -0.41
RNF40-209ENST00000566703 GGT2P36268 569 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 CD200P41217 278 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 PITPNBP48739 271 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 TPTEP56180 551 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 MAB21L1Q13394 359 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 GK2Q14410 553 aaPredicted RBP12.52□□□□□ -0.41
RNF40-209ENST00000566703 C16orf87Q6PH81 154 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 FAM86B1Q8N7N1 296 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 BHLHE23Q8NDY6 225 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 OR4K13Q8NH42 304 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 FANK1Q8TC84 345 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 DUX5Q96PT3 197 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 ATF6BQ99941 703 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 SLITRK2Q9H156 845 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 ADA2Q9NZK5 511 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 CLN8Q9UBY8 286 aa12.52□□□□□ -0.41
RNF40-209ENST00000566703 LCATP04180 440 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 SEMG1P04279 462 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 HLA-DPB1P04440 258 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 LIPFP07098 398 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 NOS3P29474 1203 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 GSSP48637 474 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 NPY4RP50391 375 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 RAD23AP54725 363 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 WDR25Q64LD2 544 aaPredicted RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 PGAP1Q75T13 922 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 FITM2Q8N6M3 262 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 GNPDA2Q8TDQ7 276 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 MCUR1Q96AQ8 359 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 NUDT16L1Q9BRJ7 211 aaKnown RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 IFT27Q9BW83 186 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 WDR76Q9H967 626 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 PNRC2Q9NPJ4 139 aaKnown RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 RPRD1BQ9NQG5 326 aaKnown RBP12.51□□□□□ -0.41
RNF40-209ENST00000566703 ZNF446Q9NWS9 450 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 MAGEL2Q9UJ55 1249 aa12.51□□□□□ -0.41
RNF40-209ENST00000566703 OR6C68A6NDL8 312 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 NDUFA2O43678 99 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 OR10H3O60404 316 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 GMDSO60547 372 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
RNF40-209ENST00000566703 HLA-DQA2P01906 255 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 HSD17B1P14061 328 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 ZNF823P16415 610 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 PSMB10P40306 273 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 SPIBQ01892 262 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 TSPAN31Q12999 210 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 CLEC12AQ5QGZ9 265 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 CD276Q5ZPR3 534 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 ZNF841Q6ZN19 808 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 MRPL21Q7Z2W9 205 aaKnown RBP12.5□□□□□ -0.41
RNF40-209ENST00000566703 NAA40Q86UY6 237 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 LINC00346Q8IVM7 164 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
RNF40-209ENST00000566703 SPTSSAQ969W0 71 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 SLCO4A1Q96BD0 722 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 IL1RAPQ9NPH3 570 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 NOX4Q9NPH5 578 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 MED4Q9NPJ6 270 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 TRIM36Q9NQ86 728 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 MMP24Q9Y5R2 645 aa12.5□□□□□ -0.41
RNF40-209ENST00000566703 IGHV3-64DA0A0J9YX35 117 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 A0A1B0GUS0 222 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 CD300LBA8K4G0 201 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 M0R135 149 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 ENSAO43768 121 aaKnown RBP12.49□□□□□ -0.41
RNF40-209ENST00000566703 FAM20BO75063 409 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 HMGA2P52926 109 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 C11orf91Q3C1V1 193 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 ZNF362Q5T0B9 420 aaPredicted RBP12.49□□□□□ -0.41
RNF40-209ENST00000566703 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 OR10S1Q8NGN2 331 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 ZNF799Q96GE5 643 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 DDOQ99489 341 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 ELAC2Q9BQ52 826 aaKnown RBP12.49□□□□□ -0.41
RNF40-209ENST00000566703 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
RNF40-209ENST00000566703 FN3KRPQ9HA64 309 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 MRPL22Q9NWU5 206 aaKnown RBP12.49□□□□□ -0.41
RNF40-209ENST00000566703 ERVK-18Q9QC07 812 aa12.49□□□□□ -0.41
RNF40-209ENST00000566703 RNF7Q9UBF6 113 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms