RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ASCC3Q8N3C0 2202 aaKnown RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 TO15178 435 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 IGHMP01871 453 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 BIDP55957 195 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 HSF1Q00613 529 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 SNTB1Q13884 538 aaKnown RBP12.69□□□□□ -0.38
CDH1-209ENST00000566510 ANGPTL5Q86XS5 388 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 ARMC10Q8N2F6 343 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 TSTD1Q8NFU3 115 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 MRGPRFQ96AM1 343 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 SLAMF6Q96DU3 332 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 SLC7A5P2Q9GIP4 190 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 GAREM1Q9H706 876 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 POLR1DQ9Y2S0 133 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 FTCDNL1E5RQL4 147 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 VSIG8P0DPA2 414 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 RAB6AP20340 208 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 ZNF345Q14585 488 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 GFOD2Q3B7J2 385 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 DMRTC1Q5HYR2 192 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 MOB3CQ70IA8 216 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 SLC22A24Q8N4F4 322 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 OR1M1Q8NGA1 313 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 OR5D14Q8NGL3 314 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 MARCH1Q8TCQ1 289 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 MYOZ1Q9NP98 299 aaPredicted RBP12.69□□□□□ -0.38
CDH1-209ENST00000566510 SLC2A4RGQ9NR83 387 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 ASF1BQ9NVP2 202 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 KCNK7Q9Y2U2 307 aa12.69□□□□□ -0.38
CDH1-209ENST00000566510 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 LOC390937A0A1W2PQ73 354 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 TTRP02766 147 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 SLC2A1P11166 492 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 SLC25A4P12235 298 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 CASRP41180 1078 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 TDGQ13569 410 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 MITD1Q8WV92 249 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 C11orf40Q8WZ69 217 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 PTX4Q96A99 478 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 MVB12AQ96EY5 273 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 UCK1Q9HA47 277 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 ZNF107Q9UII5 783 aaPredicted RBP12.68□□□□□ -0.38
CDH1-209ENST00000566510 FAM74A7A6NL05 159 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 C2CD4DB7Z1M9 353 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 C10orf142B7Z368 130 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 ZNF208O43345 1280 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 IGLV3-19P01714 112 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 ICAM2P13598 275 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 RAB3AP20336 220 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 RNF4P78317 190 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 FAM74A3Q4VXF1 159 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 C14orf28Q4W4Y0 310 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 PAN3Q58A45 887 aaKnown RBP12.68□□□□□ -0.38
CDH1-209ENST00000566510 RNF144BQ7Z419 303 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 OR51E1Q8TCB6 317 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 TMEM41AQ96HV5 264 aa12.68□□□□□ -0.38
CDH1-209ENST00000566510 H3BMH7 237 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 PGAM2P15259 253 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 ZNF20P17024 532 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 HSD11B1P28845 292 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 ZNF93P35789 620 aaPredicted RBP12.67□□□□□ -0.38
CDH1-209ENST00000566510 MMP16P51512 607 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 LBX1P52954 281 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 EMP2P54851 167 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 PHF19Q5T6S3 580 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 OR2I1PQ8NGU4 316 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 OR4K15Q8NH41 348 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 DCUN1D4Q92564 292 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
CDH1-209ENST00000566510 FAM206AQ9NX38 181 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 SLC39A1Q9NY26 324 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 PCDHB10Q9UN67 800 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 WDFY3Q8IZQ1 3526 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 SHISA7A6NL88 538 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 GIMD1P0DJR0 217 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 ABOP16442 354 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 LTBRP36941 435 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 PPIAP62937 165 aaKnown RBP12.67□□□□□ -0.38
CDH1-209ENST00000566510 PTCRAQ6ISU1 281 aaPredicted RBP12.67□□□□□ -0.38
CDH1-209ENST00000566510 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
CDH1-209ENST00000566510 BANF2Q9H503 90 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 CHMP1AQ9HD42 196 aaPredicted RBP12.67□□□□□ -0.38
CDH1-209ENST00000566510 SLC2A8Q9NY64 477 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 CSAG2Q9Y5P2 127 aa12.67□□□□□ -0.38
CDH1-209ENST00000566510 EFSO43281 561 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 ZNF354AO60765 605 aaPredicted RBP12.66□□□□□ -0.38
CDH1-209ENST00000566510 MPIG6BO95866 241 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 GP1BAP07359 652 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 CD37P11049 281 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 SERPINF1P36955 418 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 CLDN6P56747 220 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 INPP5JQ15735 1006 aaPredicted RBP12.66□□□□□ -0.38
CDH1-209ENST00000566510 CARD17Q5XLA6 110 aa12.66□□□□□ -0.38
CDH1-209ENST00000566510 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms