RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 OR4K5Q8NGD3 323 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 NPRL2Q8WTW4 380 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 CANT1Q8WVQ1 401 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 HIST1H2ACQ93077 130 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 LHX4Q969G2 390 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 WDFY2Q96P53 400 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 TMEM246Q9BRR3 403 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 PPA2Q9H2U2 334 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 NANSQ9NR45 359 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 ARMC1Q9NVT9 282 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 TMEM38BQ9NVV0 291 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 GLTPQ9NZD2 209 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 TMCC3Q9ULS5 477 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 TMEM5Q9Y2B1 443 aa7.48□□□□□ -1.21
VPS9D1-205ENST00000565452 LCE6AA0A183 80 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 C5orf49A4QMS7 147 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 PHYHO14832 338 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ZNF205O95201 554 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 FSTL3O95633 263 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 HPRP00739 348 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 CST1P01037 141 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 THY1P04216 161 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 FBP1P09467 338 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 VSIG10L2P0DP72 767 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 FCGR1AP12314 374 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 CBLP22681 906 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 RRM2P31350 389 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 SLC9A3P48764 834 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 NPY4RP50391 375 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 GDI2P50395 445 aaKnown RBP7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 MMP16P51512 607 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ARHGDIAP52565 204 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 EFNB2P52799 333 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ACTR3P61158 418 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 PPP1CBP62140 327 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 PRKCDQ05655 676 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 HNRNPA0Q13151 305 aaKnown RBP7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 OR2T5Q6IEZ7 315 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 LRFN4Q6PJG9 635 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ARL9Q6T311 187 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 NHLRC1Q6VVB1 395 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 C1orf122Q6ZSJ8 110 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 TMPRSS11FQ6ZWK6 438 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 MBOAT2Q6ZWT7 520 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 TSEN54Q7Z6J9 526 aaKnown RBP7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 PXKQ7Z7A4 578 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 NDUFA11Q86Y39 141 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 NKAIN4Q8IVV8 208 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ADGRG5Q8IZF4 528 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 FAM86B1Q8N7N1 296 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 OR2T29Q8NH02 315 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 OR5R1Q8NH85 324 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ITLN1Q8WWA0 313 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 TMEM54Q969K7 222 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 RSRC1Q96IZ7 334 aaKnown RBP7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 TBX15Q96SF7 602 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 CHID1Q9BWS9 393 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 CDADC1Q9BWV3 514 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ASPNQ9BXN1 380 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 CNTD2Q9H8S5 307 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ELOVL3Q9HB03 270 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 GCM1Q9NP62 436 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 MRPL39Q9NYK5 338 aaKnown RBP7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 NKX1-2Q9UD57 310 aaPredicted RBP7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 ZNF229Q9UJW7 825 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 AURKCQ9UQB9 309 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 SIGLEC9Q9Y336 463 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 AP4S1Q9Y587 144 aa7.47□□□□□ -1.21
VPS9D1-205ENST00000565452 IGKV1D-42A0A075B6H8 117 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 A0A087WUU8 490 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 LRRC30A6NM36 301 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 J3KTA2 159 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 GNGT2O14610 69 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 FBXO24O75426 580 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 ZFPL1O95159 310 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 OR6A2O95222 327 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 BGLAPP02818 100 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 ASAH2BP0C7U1 165 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 MMP9P14780 707 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 FUT1P19526 365 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 TUBG1P23258 451 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 WNT5AP41221 380 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 YAP1P46937 504 aaKnown RBP7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 PUDPQ08623 228 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 COX10Q12887 443 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 ZNF74Q16587 644 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 DMRTC1Q5HYR2 192 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 PABPC1L2AQ5JQF8 200 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 ZNF730Q6ZMV8 503 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 WDR88Q6ZMY6 472 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 TSPYL5Q86VY4 417 aaPredicted RBP7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 ZNF101Q8IZC7 436 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 C1orf87Q8N0U7 546 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 OR4C13Q8NGP0 309 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 OR5J2Q8NH18 312 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 OR6X1Q8NH79 312 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 MUC7Q8TAX7 377 aa7.46□□□□□ -1.22
VPS9D1-205ENST00000565452 ABHD4Q8TB40 342 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms