RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FOXL2P58012 376 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 LPCAT3Q6P1A2 487 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DCXRQ7Z4W1 244 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR10C1Q96KK4 312 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NECAB3Q96P71 396 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 GPX7Q96SL4 187 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF587Q96SQ5 575 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 M0R036 132 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 KNG1P01042 644 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ARG1P05089 322 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ABCD3P28288 659 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 HAAOP46952 286 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DCDP81605 110 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 UNC119Q13432 240 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ADAM5Q6NVV9 412 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DRAM2Q6UX65 266 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TAF8Q7Z7C8 310 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR4K15Q8NH41 348 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 METTL21EPA6NDL7 271 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF264O43296 627 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CCINQ13939 588 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SLC43A2Q8N370 569 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 EDAQ92838 391 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TMEM41AQ96HV5 264 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MMP26Q9NRE1 261 aa18.32■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PQLC2LA1A4F0 135 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 GLI4P10075 376 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF44P15621 663 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF14P17017 642 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 RAB6AP20340 208 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ARRB1P49407 418 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SOX7Q9BT81 388 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SEC11CQ9BY50 192 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DZANK1Q9NVP4 752 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 HHLA2Q9UM44 414 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OPN1LWP04000 364 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 GPM6BQ13491 265 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF260Q3ZCT1 412 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF776Q68DI1 518 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR2A2Q6IF42 318 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DHRS11Q6UWP2 260 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ST6GALNAC5Q9BVH7 336 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 LPAR3Q9UBY5 353 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CARHSP1Q9Y2V2 147 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C1orf196B1AJZ1 125 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF205O95201 554 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 UTS2O95399 124 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PNMTP11086 282 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZNF600Q6ZNG1 722 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR5D18Q8NGL1 313 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 AMDHD2Q9Y303 409 aa18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TMEM184BQ9Y519 407 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TEX13DA0A0J9YY54 714 aaPredicted RBP18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PRSS37A4D1T9 235 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C2orf74A8MZ97 194 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TNFSF14O43557 240 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MPIG6BO95866 241 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ADH1BP00325 375 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 APODP05090 189 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR8U9P0C7N5 309 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 GPR3P46089 330 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SKP2Q13309 424 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PNLDC1Q8NA58 520 aaKnown RBP18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR8U1Q8NH10 309 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SLC2A4RGQ9NR83 387 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 C17orf105B2RV13 164 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 GLRA1P23415 457 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NCMAPQ5T1S8 102 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 BMFQ96LC9 184 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 OR52A1Q9UKL2 312 aa18.3■□□□□ 0.52
MAP1LC3B-206ENST00000564844 A0A1W2PPH5 198 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MBTPS2O43462 519 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SCGB1D2O95969 90 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MEF2DQ14814 521 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 AWAT2Q6E213 333 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 KCTD18Q6PI47 426 aaPredicted RBP18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ANGPTL5Q86XS5 388 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DEFB119Q8N690 84 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TMEM104Q8NE00 496 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SLC30A7Q8NEW0 376 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NPRL2Q8WTW4 380 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TCEAL3Q969E4 200 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 DUS4LO95620 317 aaKnown RBP18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ISXQ2M1V0 245 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CLEC18BQ6UXF7 455 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 MISPQ8IVT2 679 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SLC22A8Q8TCC7 542 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SLC37A2Q8TED4 501 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 WDR92Q96MX6 357 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 EMC6Q9BV81 110 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 UBQLN4Q9NRR5 601 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NUP210LQ5VU65 1888 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 SOCS1O15524 211 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 VSIG8P0DPA2 414 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 FHITP49789 147 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CLDN6P56747 220 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CLINT1Q14677 625 aa18.29■□□□□ 0.52
MAP1LC3B-206ENST00000564844 ANKRD55Q3KP44 614 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms