RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ABCB10Q9NRK6 738 aa13.64□□□□□ -0.23
COMMD4-210ENST00000564587 MALT1Q9UDY8 824 aa13.64□□□□□ -0.23
COMMD4-210ENST00000564587 CLEC4AQ9UMR7 237 aa13.64□□□□□ -0.23
COMMD4-210ENST00000564587 ZZEF1O43149 2961 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 TRAV8-7A0A075B6U6 113 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 A0A1B0GTI1 187 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 F5H5K5 113 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 MTRF1O75570 445 aaKnown RBP13.63□□□□□ -0.23
COMMD4-210ENST00000564587 TPPPO94811 219 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 MAS1P04201 325 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 CD37P11049 281 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 SLC2A2P11168 524 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-210ENST00000564587 GABRA1P14867 456 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 ZNF20P17024 532 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 ELK1P19419 428 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 CRYGSP22914 178 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 SLC6A9P48067 706 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 PITPNAQ00169 270 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 TBR1Q16650 682 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 EIF2S3LQ2VIR3 472 aaKnown RBP13.63□□□□□ -0.23
COMMD4-210ENST00000564587 KRTAP27-1Q3LI81 207 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 UBE2NLQ5JXB2 153 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 FAM57BQ71RH2 274 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 FAM214BQ7L5A3 538 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 PRSS45Q7RTY3 260 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 NUFIP2Q7Z417 695 aaKnown RBP13.63□□□□□ -0.23
COMMD4-210ENST00000564587 LYSMD2Q8IV50 215 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 SKA3Q8IX90 412 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 CDH26Q8IXH8 852 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 CCDC36Q8IYA8 594 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 SETD6Q8TBK2 473 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 C15orf40Q8WUR7 153 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 RAB40AQ8WXH6 277 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 NANOS1Q8WY41 292 aaKnown RBP13.63□□□□□ -0.23
COMMD4-210ENST00000564587 GPR137Q96N19 417 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 TRIB1Q96RU8 372 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 GFI1Q99684 422 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 EXTL2Q9UBQ6 330 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 STEAP1Q9UHE8 339 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 WDFY3Q8IZQ1 3526 aa13.63□□□□□ -0.23
COMMD4-210ENST00000564587 DHRS7CA6NNS2 312 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 SLC17A2O00624 439 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 IGLV3-1P01715 115 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 HOXD4P09016 255 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-210ENST00000564587 MMP7P09237 267 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-210ENST00000564587 ADRA2CP18825 462 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 DDOSTP39656 456 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 PSG4Q00888 419 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 TGFBR3Q03167 851 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 SCN1BQ07699 218 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 FAPQ12884 760 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 IL18Q14116 193 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 ZNF79Q15937 498 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 PYDC2Q56P42 97 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 PYHIN1Q6K0P9 492 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 ANKRD16Q6P6B7 361 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 FAM180AQ6UWF9 173 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 Q6ZSR3 168 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
COMMD4-210ENST00000564587 COMMD2Q86X83 199 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 OR8H2Q8N162 312 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 PLPP7Q8NBV4 271 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 OR51E1Q8TCB6 317 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 ORAI1Q96D31 301 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 RGCCQ9H4X1 137 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 PPP1R3EQ9H7J1 279 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 RNF121Q9H920 327 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 GPR84Q9NQS5 396 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 TAS2R4Q9NYW5 299 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 LHX6Q9UPM6 363 aa13.62□□□□□ -0.23
COMMD4-210ENST00000564587 LOC390937A0A1W2PQ73 354 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 WDR1O75083 606 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 UBL3O95164 117 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 IGHV3-9P01782 118 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 PDGFAP04085 211 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 CRHP06850 196 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 HOXB1P14653 301 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-210ENST00000564587 SNRPBP14678 240 aaKnown RBP13.61□□□□□ -0.23
COMMD4-210ENST00000564587 RAB3AP20336 220 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 GNALP38405 381 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 HTR5AP47898 357 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 PITPNBP48739 271 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 RAB11BQ15907 218 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 TRIM16LQ309B1 348 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 PLEKHN1Q494U1 663 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-210ENST00000564587 ACSF3Q4G176 576 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-210ENST00000564587 HES5Q5TA89 166 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 NSUN5P2Q63ZY6 315 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 ZNF774Q6NX45 483 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 OR6M1Q8NGM8 313 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 OR6K3Q8NGY3 331 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 SNRNP27Q8WVK2 155 aaKnown RBP13.61□□□□□ -0.23
COMMD4-210ENST00000564587 FGGYQ96C11 551 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 ABHD17AQ96GS6 310 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 SDHCQ99643 169 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-210ENST00000564587 WNT5BQ9H1J7 359 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 LIN7BQ9HAP6 207 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 TMEM138Q9NPI0 162 aa13.61□□□□□ -0.23
COMMD4-210ENST00000564587 ALX3O95076 343 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms