RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 RGCCQ9H4X1 137 aa16.31■□□□□ 0.2
SYNGR3-203ENST00000563869 PNRC2Q9NPJ4 139 aaKnown RBP16.31■□□□□ 0.2
SYNGR3-203ENST00000563869 CA10Q9NS85 328 aa16.31■□□□□ 0.2
SYNGR3-203ENST00000563869 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
SYNGR3-203ENST00000563869 TPRKBQ9Y3C4 175 aa16.31■□□□□ 0.2
SYNGR3-203ENST00000563869 CMAHPQ9Y471 501 aa16.31■□□□□ 0.2
SYNGR3-203ENST00000563869 F5H5K5 113 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 SIAH2O43255 324 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 WBP4O75554 376 aaKnown RBP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 CLIC3O95833 236 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 MRPL3P09001 348 aaKnown RBP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 GNAO1P09471 354 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 LIPAP38571 399 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 OPRL1P41146 370 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 SLC6A9P48067 706 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 SNTB2Q13425 540 aaKnown RBP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 KRTAP27-1Q3LI81 207 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 ZNF718Q3SXZ3 478 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 RGS7BPQ6MZT1 257 aaPredicted RBP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 LYPD4Q6UWN0 246 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 BCDIN3DQ7Z5W3 292 aaKnown RBP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 AKAP1Q92667 903 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 MYDGFQ969H8 173 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 Q96MF0 132 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 OR8B4Q96RC9 309 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 FGF20Q9NP95 211 aaPredicted RBP16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 GRIP1Q9Y3R0 1128 aa16.3■□□□□ 0.2
SYNGR3-203ENST00000563869 LOC100509620A0A075B734 347 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 SELEP16581 610 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 GCH1P30793 250 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 ZMAT1Q5H9K5 638 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 RBM48Q5RL73 367 aaKnown RBP16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 C6orf141Q5SZD1 244 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 TMPRSS11AQ6ZMR5 421 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 ZNF283Q8N7M2 679 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 KBTBD8Q8NFY9 601 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 CNIH3Q8TBE1 160 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 DOK1Q99704 481 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 C1QTNF5Q9BXJ0 243 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 YTHDF1Q9BYJ9 559 aaKnown RBP16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 SLCO1C1Q9NYB5 712 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 IKZF2Q9UKS7 526 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 EXOSC1Q9Y3B2 195 aaKnown RBP16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 DSCAMO60469 2012 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 CSPG4Q6UVK1 2322 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 RAI1Q7Z5J4 1906 aaPredicted RBP16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 RTTNQ86VV8 2226 aa16.29■□□□□ 0.2
SYNGR3-203ENST00000563869 B9A039 149 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 XRCC2O43543 280 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 FAM20BO75063 409 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 IGHA1P01876 353 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 LCKP06239 509 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 ERCC1P07992 297 aaPredicted RBP16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 ACSM4P0C7M7 580 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 CALCRP30988 508 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 FABP6P51161 128 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 MMP16P51512 607 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 PSMA6P60900 246 aaKnown RBP16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 EFNB3Q15768 340 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 B3GLCTQ6Y288 498 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 COLCA1Q6ZS62 124 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 SYS1Q8N2H4 156 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 ABHD4Q8TB40 342 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 LGALS12Q96DT0 336 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 TMEM80Q96HE8 168 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 OR10A2Q9H208 303 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 CYSLTR2Q9NS75 346 aa16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 DIMT1Q9UNQ2 313 aaKnown RBP16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 NOP16Q9Y3C1 178 aaKnown RBP16.28■□□□□ 0.2
SYNGR3-203ENST00000563869 A0A1W2PQL4 384 aaPredicted RBP16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 METTL15A6NJ78 407 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 J3QRE1 110 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 SMAD7O15105 426 aaKnown RBP16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 MRPS14O60783 128 aaKnown RBP16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 LCATP04180 440 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 SERPINF1P36955 418 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 RPS27P42677 84 aaKnown RBP16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 CX3CR1P49238 355 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 PPP1CBP62140 327 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 GALEQ14376 348 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 MBNL2Q5VZF2 373 aaKnown RBP16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 STX19Q8N4C7 294 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 FTMTQ8N4E7 242 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 ZNF540Q8NDQ6 660 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 CCDC54Q8NEL0 328 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 OR10S1Q8NGN2 331 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 OR1J1Q8NGS3 322 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 SMAP2Q8WU79 429 aaPredicted RBP16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 HS3ST6Q96QI5 342 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 CXorf56Q9H5V9 222 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 LRP12Q9Y561 859 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 PMF1-BGLAPU3KQ54 211 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 ARID1AO14497 2285 aa16.27■□□□□ 0.2
SYNGR3-203ENST00000563869 INAFM1C9JVW0 142 aa16.26■□□□□ 0.19
SYNGR3-203ENST00000563869 RAC2P15153 192 aa16.26■□□□□ 0.19
SYNGR3-203ENST00000563869 ZNF250P15622 560 aa16.26■□□□□ 0.19
SYNGR3-203ENST00000563869 TTKP33981 857 aa16.26■□□□□ 0.19
SYNGR3-203ENST00000563869 KLF3P57682 345 aaPredicted RBP16.26■□□□□ 0.19
SYNGR3-203ENST00000563869 SNRPD2P62316 118 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms