RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 KCNG2Q9UJ96 466 aa14.87□□□□□ -0.03
NME3-205ENST00000563854 SAMHD1Q9Y3Z3 626 aaKnown RBP14.87□□□□□ -0.03
NME3-205ENST00000563854 CEACAM18A8MTB9 384 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 M0R135 149 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 GYPBP06028 91 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 SPARCP09486 303 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 MAGEA2P43356 314 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 HMGA2P52926 109 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 GK2Q14410 553 aaPredicted RBP14.86□□□□□ -0.03
NME3-205ENST00000563854 KRTAP27-1Q3LI81 207 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 FAM98BQ52LJ0 330 aaKnown RBP14.86□□□□□ -0.03
NME3-205ENST00000563854 ARMCX4Q5H9R4 360 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 LCN8Q6JVE9 175 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 C12orf54Q6X4T0 127 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 COLCA1Q6ZS62 124 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 RASSF6Q6ZTQ3 369 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 PGAP1Q75T13 922 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 MUC20Q8N307 709 aaPredicted RBP14.86□□□□□ -0.03
NME3-205ENST00000563854 SPRYD4Q8WW59 207 aaPredicted RBP14.86□□□□□ -0.03
NME3-205ENST00000563854 ZNRF4Q8WWF5 429 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 SPTSSAQ969W0 71 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 ZNF799Q96GE5 643 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 SUCNR1Q9BXA5 334 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 MAGIXQ9H6Y5 334 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 ARMC1Q9NVT9 282 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 OR5V1Q9UGF6 321 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 N6AMT1Q9Y5N5 214 aa14.86□□□□□ -0.03
NME3-205ENST00000563854 ARHGAP32A7KAX9 2087 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 LRRC30A6NM36 301 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 IFNL4K9M1U5 179 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 PSKH1P11801 424 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 RPS2P15880 293 aaKnown RBP14.85□□□□□ -0.03
NME3-205ENST00000563854 HILS1P60008 231 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 CRMP1Q14194 572 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 FAM201AQ5SY85 155 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 OR2T5Q6IEZ7 315 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 ZNF770Q6IQ21 691 aaPredicted RBP14.85□□□□□ -0.03
NME3-205ENST00000563854 DCXRQ7Z4W1 244 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 ARHGAP24Q8N264 748 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 CCDC197Q8NCU1 140 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 OR10S1Q8NGN2 331 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 OR6K6Q8NGW6 343 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 OR2T29Q8NH02 315 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 OR4Q3Q8NH05 313 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 LRGUKQ96M69 825 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 COPS4Q9BT78 406 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 MUC13Q9H3R2 512 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 IL20Q9NYY1 176 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 COMMD3-BMI1R4GMX3 469 aa14.85□□□□□ -0.03
NME3-205ENST00000563854 F5H0A9 414 aaPredicted RBP14.84□□□□□ -0.03
NME3-205ENST00000563854 TRAPPC2LH3BP13 241 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 TRIM77I1YAP6 450 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 IRF2P14316 349 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 CALB2P22676 271 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 PRKXP51817 358 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 RAD23AP54725 363 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 MS4A2Q01362 244 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 TRIM25Q14258 630 aaKnown RBP14.84□□□□□ -0.03
NME3-205ENST00000563854 TAF13Q15543 124 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 SNAI3Q3KNW1 292 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 PRAMEF6Q5VXH4 476 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 SPATC1Q76KD6 591 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 LNX2Q8N448 690 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 ZNF511Q8NB15 262 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 DEFB108BQ8NET1 73 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 OR2T33Q8NG76 320 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 OR2AE1Q8NHA4 323 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 OTULINQ96BN8 352 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 CLPTM1LQ96KA5 538 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 JMJD8Q96S16 334 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 MRI1Q9BV20 369 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 CENPMQ9NSP4 180 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 UFSP2Q9NUQ7 469 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 AUP1Q9Y679 476 aa14.84□□□□□ -0.03
NME3-205ENST00000563854 GGT3PA6NGU5 568 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 CLUP10909 449 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 SLC2A1P11166 492 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 CA6P23280 308 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 FMO3P31513 532 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 ENTPD1P49961 510 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 ZNF154Q13106 437 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 OR8G1Q15617 311 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 MICAQ29983 383 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 C1orf87Q8N0U7 546 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 C19orf18Q8NEA5 215 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 OR10G2Q8NGC3 310 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 ZFAND2BQ8WV99 257 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 DDOQ99489 341 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 ADAT1Q9BUB4 502 aaKnown RBP14.83□□□□□ -0.04
NME3-205ENST00000563854 SSBP3Q9BWW4 388 aaPredicted RBP14.83□□□□□ -0.04
NME3-205ENST00000563854 LRCH1Q9Y2L9 728 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 INSIG2Q9Y5U4 225 aa14.83□□□□□ -0.04
NME3-205ENST00000563854 WNK2Q9Y3S1 2297 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 PPIAL4EA0A075B759 164 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 PPIAL4CA0A0B4J2A2 164 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 C5orf63A6NC05 138 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 RIIAD1A6NNX1 92 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 A8MXK9 166 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 PPIAL4DF5H284 164 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 FAM107AO95990 144 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms