RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 CD200P41217 278 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 CDKN2AP42771 156 aaKnown RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 RAD23AP54725 363 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 RPL15P61313 204 aaKnown RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 RELBQ01201 579 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 MEP1BQ16820 701 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 CORO6Q6QEF8 472 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 COLCA1Q6ZS62 124 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 CBLL1Q75N03 491 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 C19orf18Q8NEA5 215 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 SPRYD4Q8WW59 207 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 UBE2FQ969M7 185 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 SLCO4A1Q96BD0 722 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 HSH2DQ96JZ2 352 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 GPX7Q96SL4 187 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 KRCC1Q9NPI7 259 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 CMTM6Q9NX76 183 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 RNF7Q9UBF6 113 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 AURKCQ9UQB9 309 aa13.78□□□□□ -0.2
CMTM3-205ENST00000562707 NOP16Q9Y3C1 178 aaKnown RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 FAM32AQ9Y421 112 aaKnown RBP13.78□□□□□ -0.2
CMTM3-205ENST00000562707 F5H5K5 113 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 LCATP04180 440 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 H1F0P07305 194 aaKnown RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 SFTPBP07988 381 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 PRSS12P56730 875 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 LIPEQ05469 1076 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 COX10Q12887 443 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 ECH1Q13011 328 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 GK2Q14410 553 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 OR8G1Q15617 311 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 RSPO1Q2MKA7 263 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 SLC36A3Q495N2 470 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 CLEC12AQ5QGZ9 265 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 PTCHD4Q6ZW05 846 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 PGAP1Q75T13 922 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 BOLLQ8N9W6 283 aaKnown RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 PNLDC1Q8NA58 520 aaKnown RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 OR2AJ1Q8NGZ0 328 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 SLC7A13Q8TCU3 470 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 DYRK2Q92630 601 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 RSRC1Q96IZ7 334 aaKnown RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 WDFY2Q96P53 400 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 TSSK2Q96PF2 358 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 PITX2Q99697 317 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 SLC22A4Q9H015 551 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 FN3KRPQ9HA64 309 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 SRA1Q9HD15 236 aaKnown RBP13.77□□□□□ -0.21
CMTM3-205ENST00000562707 ACOXLQ9NUZ1 547 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 RNF114Q9Y508 228 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 ENPP4Q9Y6X5 453 aa13.77□□□□□ -0.21
CMTM3-205ENST00000562707 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 LGALS8O00214 317 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 NDUFA2O43678 99 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 TXNDC12O95881 172 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 SERPINA1P01009 418 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 ACSM4P0C7M7 580 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 MDH1P40925 334 aaKnown RBP13.76□□□□□ -0.21
CMTM3-205ENST00000562707 SF3A3Q12874 501 aaKnown RBP eCLIP13.76□□□□□ -0.21
CMTM3-205ENST00000562707 MPPED2Q15777 294 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 FGD3Q5JSP0 725 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 METTL11BQ5VVY1 283 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 PRAMEF6Q5VXH4 476 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 SFRP4Q6FHJ7 346 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-205ENST00000562707 MRPL21Q7Z2W9 205 aaKnown RBP13.76□□□□□ -0.21
CMTM3-205ENST00000562707 SLC15A3Q8IY34 581 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 RCN3Q96D15 328 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 TBX15Q96SF7 602 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 ATF6BQ99941 703 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 TRIM36Q9NQ86 728 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 GMPR2Q9P2T1 348 aaKnown RBP13.76□□□□□ -0.21
CMTM3-205ENST00000562707 B9D1Q9UPM9 204 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 CAPN7Q9Y6W3 813 aa13.76□□□□□ -0.21
CMTM3-205ENST00000562707 TGP01266 2768 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 IGLV1-36A0A0B4J1U3 117 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 A0A1W2PRQ8 180 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 ADAM20O43506 726 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 RENP00797 406 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 CA6P23280 308 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 OMPP47874 163 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 TPTEP56180 551 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 DGCR6Q14129 220 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 OR8B8Q15620 311 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 TAF9Q16594 264 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 KRTAP27-1Q3LI81 207 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 RHOUQ7L0Q8 258 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 LINC00346Q8IVM7 164 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 SCCPDHQ8NBX0 429 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 FAM162AQ96A26 154 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 ERMAPQ96PL5 475 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-205ENST00000562707 PKP2Q99959 881 aa13.75□□□□□ -0.21
CMTM3-205ENST00000562707 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
CMTM3-205ENST00000562707 TRAV38-1A0A0B4J264 116 aa13.74□□□□□ -0.21
CMTM3-205ENST00000562707 IGHV1-69DA0A0B4J2H0 117 aa13.74□□□□□ -0.21
CMTM3-205ENST00000562707 C3orf80F5H4A9 247 aa13.74□□□□□ -0.21
CMTM3-205ENST00000562707 DCTN6O00399 190 aa13.74□□□□□ -0.21
CMTM3-205ENST00000562707 GPR137BO60478 399 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms