RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 KPNA4O00629 521 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 CHST10O43529 356 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 AIREO43918 545 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 GALR3O60755 368 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 BCAS1O75363 584 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 NME6O75414 186 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 WBP4O75554 376 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 CDC123O75794 336 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 SERPINI2O75830 405 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR6B1O95007 311 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 GABARAPO95166 117 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RCBTB2O95199 551 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FADS2O95864 444 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 TGM6O95932 706 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TOMM40O96008 361 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PRSS2P07478 247 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CYC1P08574 325 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ACAA1P09110 424 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 RNH1P13489 461 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 MYL12AP19105 171 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 NT5EP21589 574 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PCMT1P22061 227 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 GALP22466 123 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PSMA1P25786 263 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 PSMB9P28065 219 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PSMB5P28074 263 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 IL2RGP31785 369 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CCKARP32238 428 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 S100A5P33763 92 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 POLR2IP36954 125 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 FEN1P39748 380 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 RBM34P42696 430 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 CLK1P49759 484 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 SSR4P51571 173 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CRYBA2P53672 197 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 F2RL1P55085 397 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 HSD17B7P56937 341 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RAB38P57729 211 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RGS8P57771 180 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 LINC00205P59089 165 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CRYZQ08257 329 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 ST3GAL4Q11206 333 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RAB40BQ12829 278 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TSPAN31Q12999 210 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ZNF846Q147U1 533 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 LASP1Q14847 261 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 CTU2Q2VPK5 515 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 ANKDD1AQ495B1 522 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FAM219BQ5XKK7 198 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 C18orf63Q68DL7 685 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ADAM5Q6NVV9 412 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SLC27A4Q6P1M0 643 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 LEG1Q6P5S2 330 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ZNF613Q6PF04 617 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 C16orf87Q6PH81 154 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TMEM107Q6UX40 140 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ZNF730Q6ZMV8 503 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 QSOX2Q6ZRP7 698 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RASSF6Q6ZTQ3 369 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 MBOAT2Q6ZWT7 520 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 VN1R4Q7Z5H5 301 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TSEN54Q7Z6J9 526 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 GRAMD2AQ8IUY3 354 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PLD3Q8IV08 490 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ENTHD1Q8IYW4 607 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 HS3ST5Q8IZT8 346 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FBXL14Q8N1E6 418 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ZNF619Q8N2I2 560 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CLDN22Q8N7P3 220 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 COX18Q8N8Q8 333 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CNEP1R1Q8N9A8 125 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 MINDY2Q8NBR6 621 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR7G1Q8NGA0 311 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR4K5Q8NGD3 323 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR52P1PQ8NH57 321 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR51Q1Q8NH59 317 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR52J3Q8NH60 311 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FAM81AQ8TBF8 368 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TEX47Q8TBZ9 253 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FAM110BQ8TC76 370 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ACOT11Q8WXI4 607 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 C22orf15Q8WYQ4 148 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RAB8BQ92930 207 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 RIT1Q92963 219 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SNAPC3Q92966 411 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TMIGD2Q96BF3 282 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 NTNG2Q96CW9 530 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 LGALS12Q96DT0 336 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 YIPF6Q96EC8 236 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 MRPL48Q96GC5 212 aaKnown RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 TMEM80Q96HE8 168 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 PLEKHA8Q96JA3 519 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 JSRP1Q96MG2 331 aaPredicted RBP2.75□□□□□ -1.97
SPG11-225ENST00000561391 OR7D2Q96RA2 312 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TBX15Q96SF7 602 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ARHGDIGQ99819 225 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SLC6A7Q99884 636 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 FUNDC2Q9BWH2 189 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 MND1Q9BWT6 205 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 SUCNR1Q9BXA5 334 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms