RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CYSLTR2Q9NS75 346 aa8.63□□□□□ -1.03
HERC1-212ENST00000561348 LAMP5Q9UJQ1 280 aa8.63□□□□□ -1.03
HERC1-212ENST00000561348 CACNG2Q9Y698 323 aa8.63□□□□□ -1.03
HERC1-212ENST00000561348 CR1P17927 2039 aa8.63□□□□□ -1.03
HERC1-212ENST00000561348 IGHV4-61A0A0C4DH41 118 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 IGHV1-69-2A0A0G2JMI3 117 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 ZNF878C9JN71 531 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 INAFM1C9JVW0 142 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 NDUFS8O00217 210 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 EI24O14681 340 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 HLA-DPB1P04440 258 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 LYNP07948 512 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 ATP6V1E1P36543 226 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 CX3CR1P49238 355 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 MMP15P51511 669 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 RAD23AP54725 363 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 TIGD6Q17RP2 521 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 RSPO1Q2MKA7 263 aaPredicted RBP8.62□□□□□ -1.03
HERC1-212ENST00000561348 TMEM249Q2WGJ8 235 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 HFEQ30201 348 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 SNAI3Q3KNW1 292 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 ZMAT1Q5H9K5 638 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 LINC01590Q5TEZ4 76 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 LCN1P1Q5VSP4 162 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 KDM4DQ6B0I6 523 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 DNM1P46Q6ZS02 220 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 FAM57BQ71RH2 274 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 SHFQ7M4L6 423 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 KRT77Q7Z794 578 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 HAVCR1Q96D42 359 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 PGAM5Q96HS1 289 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 AMELYQ99218 206 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 KCNJ15Q99712 375 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
HERC1-212ENST00000561348 LPAR2Q9HBW0 351 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 S100A14Q9HCY8 104 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 PNRC2Q9NPJ4 139 aaKnown RBP8.62□□□□□ -1.03
HERC1-212ENST00000561348 ZNF275Q9NSD4 429 aaPredicted RBP8.62□□□□□ -1.03
HERC1-212ENST00000561348 IMPAD1Q9NX62 359 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 UBAP1Q9NZ09 502 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 ENOPH1Q9UHY7 261 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 GTF2A1LQ9UNN4 478 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 CHD3Q12873 2000 aaKnown RBP8.62□□□□□ -1.03
HERC1-212ENST00000561348 CSPG4Q6UVK1 2322 aa8.62□□□□□ -1.03
HERC1-212ENST00000561348 MTORP42345 2549 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 LOC100289279A0A1B0GTE1 492 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 C5orf63A6NC05 138 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 ERICH4A6NGS2 130 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 H3BNX3 289 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 PRODHO43272 600 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 APOL3O95236 402 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 RAC2P15153 192 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 ZNF16P17020 682 aaPredicted RBP8.61□□□□□ -1.03
HERC1-212ENST00000561348 ACHEP22303 614 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 LIPAP38571 399 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 CHN2P52757 468 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 GRB2P62993 217 aaKnown RBP8.61□□□□□ -1.03
HERC1-212ENST00000561348 GK2Q14410 553 aaPredicted RBP8.61□□□□□ -1.03
HERC1-212ENST00000561348 SPRNQ5BIV9 151 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 GLYATL3Q5SZD4 288 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 CYB5R2Q6BCY4 276 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 DRAM2Q6UX65 266 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 LRRN1Q6UXK5 716 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 COMMD2Q86X83 199 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 PARP8Q8N3A8 854 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 CBR4Q8N4T8 237 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 ITLN1Q8WWA0 313 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 EME1Q96AY2 570 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 TBX5Q99593 518 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 TEAD3Q99594 435 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 OSBPL10Q9BXB5 764 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 GABARAPL1Q9H0R8 117 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 ATPIF1Q9UII2 106 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 TMEFF2Q9UIK5 374 aaPredicted RBP8.61□□□□□ -1.03
HERC1-212ENST00000561348 IKZF2Q9UKS7 526 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 ZDHHC8Q9ULC8 765 aa8.61□□□□□ -1.03
HERC1-212ENST00000561348 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
HERC1-212ENST00000561348 ZAR1LA6NP61 321 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 CLDN25C9JDP6 229 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 F5H5P2 479 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 H0YL77 283 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 H3BSA7 217 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 LILRA1O75019 489 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 ZNF205O95201 554 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 TGFAP01135 160 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 SELEP16581 610 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 TUBG1P23258 451 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 CA6P23280 308 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 IL2RGP31785 369 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 ZNF121P58317 390 aaPredicted RBP8.6□□□□□ -1.03
HERC1-212ENST00000561348 CDC42P60953 191 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 ZNF92Q03936 586 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 LOXL1Q08397 574 aaPredicted RBP8.6□□□□□ -1.03
HERC1-212ENST00000561348 OR8G1Q15617 311 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 LRRC36Q1X8D7 754 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 TEX30Q5JUR7 227 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 SLC35D3Q5M8T2 416 aa8.6□□□□□ -1.03
HERC1-212ENST00000561348 ZBTB49Q6ZSB9 765 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms