RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TRBV5-5A0A0J9YX44 114 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 A0A0U1RQV5 110 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 LRRTM2O43300 516 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 TBX1O43435 398 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 SYT7O43581 403 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 MTRF1O75570 445 aaKnown RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 RAD51DO75771 328 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 TTRP02766 147 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 LCATP04180 440 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 SERPINA5P05154 406 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 UCHL1P09936 223 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 SRMP19623 302 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 CRYGSP22914 178 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 IL32P24001 234 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 STOMP27105 288 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 PCSK6P29122 969 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 APLNRP35414 380 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 TGFBR1P36897 503 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 RPS19P39019 145 aaKnown RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 RPS11P62280 158 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP3-219ENST00000561326 MRPL49Q13405 166 aaKnown RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 RSPO1Q2MKA7 263 aaPredicted RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 HSD17B12Q53GQ0 312 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 BHLHA15Q7RTS1 189 aaPredicted RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 MRGPRGQ86SM5 289 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 CXorf67Q86X51 503 aaPredicted RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 COMMD2Q86X83 199 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 RDH10Q8IZV5 341 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 RPRMLQ8N4K4 120 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 OR13C3Q8NGS6 347 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 MCFD2Q8NI22 146 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 FGFBP3Q8TAT2 258 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 ITFG2Q969R8 447 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 TRMT61AQ96FX7 289 aaKnown RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 MMP27Q9H306 513 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 TCF7L1Q9HCS4 588 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 SLC17A5Q9NRA2 495 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 B3GNT2Q9NY97 397 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 ELOVL5Q9NYP7 299 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 CCDC59Q9P031 241 aaKnown RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 CRNNQ9UBG3 495 aaPredicted RBP8.99□□□□□ -0.97
USP3-219ENST00000561326 SH3BGRL2Q9UJC5 107 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 ZNF391Q9UJN7 358 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 A3GALT2U3KPV4 340 aa8.99□□□□□ -0.97
USP3-219ENST00000561326 A0A0G2JNJ9 132 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 MEGF11A6BM72 1044 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 P2RY10O00398 339 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 CLPXO76031 633 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 DBHP09172 617 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 ACSM4P0C7M7 580 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 BMP5P22003 454 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 CFL1P23528 166 aaKnown RBP8.98□□□□□ -0.97
USP3-219ENST00000561326 CA7P43166 264 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 SOX2P48431 317 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 MXD1Q05195 221 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 INSL4Q14641 139 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 ZNF404Q494X3 552 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 LINC00299Q6ZSB3 139 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 DOK3Q7L591 496 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 NAXEQ8NCW5 288 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 CPEB3Q8NE35 698 aaKnown RBP8.98□□□□□ -0.97
USP3-219ENST00000561326 STEAP2Q8NFT2 490 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 OR5L1Q8NGL2 311 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 OR13C5Q8NGS8 318 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 OR51E1Q8TCB6 317 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 SLC7A6Q92536 515 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 AP3S1Q92572 193 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 PPP1R14AQ96A00 147 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 TMEM106AQ96A25 262 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 SLC25A46Q96AG3 418 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 MUCL1Q96DR8 90 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 DERL3Q96Q80 235 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 RGCCQ9H4X1 137 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 NOX4Q9NPH5 578 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 ZNF224Q9NZL3 707 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 Q9UFV3 132 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 OSGIN2Q9Y236 505 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 AMDHD2Q9Y303 409 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 MEMO1Q9Y316 297 aa8.98□□□□□ -0.97
USP3-219ENST00000561326 TRBV5-7A0A0A0MS05 114 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 LOC107986453A0A1B0GWG9 222 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 A0A1W2PPK0 400 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 C5orf49A4QMS7 147 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 A8MXE2 369 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 EEF1E1-BLOC1S5C9J1V9 151 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 CCL21O00585 134 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 EEF1E1O43324 174 aaKnown RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 XRCC2O43543 280 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 TMEM127O75204 238 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 SLC2A1P11166 492 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 CBR1P16152 277 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 ZNF20P17024 532 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 RAB3BP20337 219 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 PSMB1P20618 241 aaKnown RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 CCNOP22674 350 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 APEX1P27695 318 aaKnown RBP8.97□□□□□ -0.97
USP3-219ENST00000561326 S100A5P33763 92 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 RANBP1P43487 201 aa8.97□□□□□ -0.97
USP3-219ENST00000561326 MALLQ13021 153 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms