RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 VAMP5O95183 116 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SLC2A10O95528 541 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 FADS2O95864 444 aaKnown RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 IGHA1P01876 353 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 PRR23D2P0DMB1 279 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 HIST1H1CP16403 213 aaKnown RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 NR4A1P22736 598 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 RPL4P36578 427 aaKnown RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 CENPAP49450 140 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 P2RY4P51582 365 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SELENOVP59797 346 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 CTXN1P60606 82 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 LCN2P80188 198 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SRSF4Q08170 494 aaKnown RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 POU4F2Q12837 409 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 PMS2P3Q13401 168 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 CRMP1Q14194 572 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 NKPD1Q17RQ9 610 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 NHLRC1Q6VVB1 395 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 CPOQ8IVL8 374 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 WDFY1Q8IWB7 410 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 STX19Q8N4C7 294 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SLC37A3Q8NCC5 494 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 PROKR2Q8NFJ6 384 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 OR13F1Q8NGS4 319 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 OR4F5Q8NH21 305 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 MOSPD2Q8NHP6 518 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF420Q8TAQ5 688 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF417Q8TAU3 575 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF519Q8TB69 540 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SNX33Q8WV41 574 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 WFDC12Q8WWY7 111 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SGCDQ92629 289 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 TAF15Q92804 592 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 BCL2L2Q92843 193 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 RAB1CQ92928 201 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 LGALS12Q96DT0 336 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 TMEM80Q96HE8 168 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF385AQ96PM9 386 aaKnown RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF587Q96SQ5 575 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 GAL3ST1Q99999 423 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SF3B5Q9BWJ5 86 aaKnown RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 INPP5EQ9NRR6 644 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 INIPQ9NRY2 104 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 PLEK2Q9NYT0 353 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 VSX1Q9NZR4 365 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 H2AFY2Q9P0M6 372 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ERVK-18Q9QC07 812 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 DUSP13Q9UII6 198 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ADAM18Q9Y3Q7 739 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 MMP24Q9Y5R2 645 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 ISPDA4D126 451 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 CCDC182A6NF36 153 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 A6NIZ1 184 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 AQP7P3A6NL99 342 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 CENPBD1B2RD01 187 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 MS4A18H0YCH9 400 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 CLDN34H7C241 214 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 OR6A2O95222 327 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 RAB36O95755 333 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 FSHBP01225 129 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 IGHV2-5P01817 119 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 MT-ND2P03891 347 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 ADORA3P0DMS8 318 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 NAT2P11245 290 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 GTF2E2P29084 291 aaKnown RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 C21orf33P30042 268 aaPredicted RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 SELENOPP49908 381 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 DAP3P51398 398 aaKnown RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 BLVRAP53004 296 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 RAP1BP61224 184 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 RPL27P61353 136 aaKnown RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 RAP1AP62834 184 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 ROR2Q01974 943 aaKnown RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 SLC9A3R2Q15599 337 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 OR7A5Q15622 319 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 MS4A18Q3C1V0 323 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 ALKBH6Q3KRA9 238 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 SLC35F1Q5T1Q4 408 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 LCN1P1Q5VSP4 162 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 PLBD1Q6P4A8 553 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 C16orf87Q6PH81 154 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 HDDC2Q7Z4H3 204 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 MDP1Q86V88 176 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 MYPOPQ86VE0 399 aaPredicted RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 SATL1Q86VE3 508 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 CCDC36Q8IYA8 594 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 ALDH16A1Q8IZ83 802 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 KIR3DL3Q8N743 410 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 OR52E2Q8NGJ4 325 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 OR52I1Q8NGK6 324 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 DGCR14Q96DF8 476 aaKnown RBP7.9□□□□□ -1.14
SMAD3-215ENST00000560424 TSPAN32Q96QS1 320 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 TEAD3Q99594 435 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 BCL7BQ9BQE9 202 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 MRI1Q9BV20 369 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 AMBNQ9NP70 447 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 DECR2Q9NUI1 292 aa7.9□□□□□ -1.14
SMAD3-215ENST00000560424 B3GAT1Q9P2W7 334 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms