RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 TRAF4Q9BUZ4 470 aaPredicted RBP9.81□□□□□ -0.84
USP3-218ENST00000560202 SFXN3Q9BWM7 321 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 CNTNAP3Q9BZ76 1288 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 HDHD2Q9H0R4 259 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 OPN3Q9H1Y3 402 aaPredicted RBP9.81□□□□□ -0.84
USP3-218ENST00000560202 RNF121Q9H920 327 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 FAM206AQ9NX38 181 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 ZNF224Q9NZL3 707 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 OR52A1Q9UKL2 312 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 GTF2A1LQ9UNN4 478 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 ZNF281Q9Y2X9 895 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 PKD1L2Q7Z442 2459 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 TMEM212A6NML5 194 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 SYNGR3O43761 229 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 DOK2O60496 412 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 SERPINA3P01011 423 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 HLA-HP01893 362 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 COX5AP20674 150 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 PSMA6P60900 246 aaKnown RBP9.8□□□□□ -0.84
USP3-218ENST00000560202 RPS11P62280 158 aaKnown RBP eCLIP9.8□□□□□ -0.84
USP3-218ENST00000560202 GALK2Q01415 458 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ECH1Q13011 328 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 TBRG1Q3YBR2 411 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 HIKESHIQ53FT3 197 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ACSM3Q53FZ2 586 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 YIF1BQ5BJH7 314 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 C22orf42Q6IC83 251 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 GABRG1Q8N1C3 465 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ZNF676Q8N7Q3 588 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 OR13C5Q8NGS8 318 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 OR1F12Q8NHA8 337 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 AKR7LQ8NHP1 331 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 COMMD4Q9H0A8 199 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 WNT5BQ9H1J7 359 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 BRD7Q9NPI1 651 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 G6PC2Q9NQR9 355 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 SLC22A13Q9Y226 551 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 GSTK1Q9Y2Q3 226 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 PMF1-BGLAPU3KQ54 211 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 NBEAQ8NFP9 2946 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 MED12LQ86YW9 2145 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 PHF3Q92576 2039 aaKnown RBP9.8□□□□□ -0.84
USP3-218ENST00000560202 A0A0G2JNJ9 132 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 CIB4A0PJX0 185 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ZNF503-AS2A6NEH8 195 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 OR6C6A6NF89 314 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 SC5DO75845 299 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 LYZL6O75951 148 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 CRYZL1O95825 349 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 CD79AP11912 226 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 OPRM1P35372 400 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 CX3CR1P49238 355 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 GABRA6Q16445 453 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ST3GAL2Q16842 350 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ODF4Q2M2E3 257 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 RSPO1Q2MKA7 263 aaPredicted RBP9.8□□□□□ -0.84
USP3-218ENST00000560202 ZFP69Q49AA0 526 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 PABPC1L2AQ5JQF8 200 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 STEAP3Q658P3 488 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 BEND4Q6ZU67 534 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 CEACAM19Q7Z692 300 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 DPPA2Q7Z7J5 298 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 RDH10Q8IZV5 341 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ZNF433Q8N7K0 673 aaPredicted RBP9.8□□□□□ -0.84
USP3-218ENST00000560202 ZNF283Q8N7M2 679 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 OR6F1Q8NGZ6 308 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 RGP1Q92546 391 aaPredicted RBP9.8□□□□□ -0.84
USP3-218ENST00000560202 SPTSSAQ969W0 71 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 KCTD7Q96MP8 289 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 GON7Q9BXV9 100 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 PBOV1Q9GZY1 135 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 DCSTAMPQ9H295 470 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ABCB10Q9NRK6 738 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 Q9UFV3 132 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 ACACBO00763 2458 aa9.8□□□□□ -0.84
USP3-218ENST00000560202 TRGV8A0A0C4DH27 118 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 E9PLN8 166 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 F5H5K5 113 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 DVL2O14641 736 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 RAD51DO75771 328 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 UBL3O95164 117 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 APOC1P02654 83 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 DBHP09172 617 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 CRYGSP22914 178 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 OTX1P32242 354 aaPredicted RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 ARR3P36575 388 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 NR4A2P43354 598 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 HTR5AP47898 357 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 CASP6P55212 293 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 ZNF121P58317 390 aaPredicted RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 RAB1AP62820 205 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 MRPS15P82914 257 aaKnown RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 P2RY6Q15077 328 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 BCL2L15Q5TBC7 163 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 CCBE1Q6UXH8 406 aaPredicted RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 ZNF704Q6ZNC4 412 aaPredicted RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 CCDC36Q8IYA8 594 aa9.79□□□□□ -0.84
USP3-218ENST00000560202 CPEB3Q8NE35 698 aaKnown RBP9.79□□□□□ -0.84
USP3-218ENST00000560202 C1orf162Q8NEQ5 155 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms