RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 SPTSSAQ969W0 71 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 NRBF2Q96F24 287 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 DUS3LQ96G46 650 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 COG8Q96MW5 612 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 EGLN1Q9GZT9 426 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 LPAR2Q9HBW0 351 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 KRT84Q9NSB2 600 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 ZDHHC8Q9ULC8 765 aa12.58□□□□□ -0.4
RABGGTA-211ENST00000559850 SAC3D1A6NKF1 404 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 FAM157AC9JC47 383 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 TGFAP01135 160 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 HMGN1P05114 100 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 PAICSP22234 425 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 TUBG1P23258 451 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 IGFBP5P24593 272 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 LIPAP38571 399 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 NAA10P41227 235 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 TMEM33P57088 247 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 GK2Q14410 553 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 KPNB1Q14974 876 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 PTGES3Q15185 160 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 SNAPC1Q16533 368 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 PCK2Q16822 640 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 HFEQ30201 348 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 ZMAT1Q5H9K5 638 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 FAM209AQ5JX71 171 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 GLYATL3Q5SZD4 288 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 BCDIN3DQ7Z5W3 292 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 HIPK1Q86Z02 1210 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 TIGD4Q8IY51 512 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 ITLN1Q8WWA0 313 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 PLEKHA8Q96JA3 519 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 TUBG2Q9NRH3 451 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 CGGBP1Q9UFW8 167 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 KLHDC2Q9Y2U9 406 aa12.57□□□□□ -0.4
RABGGTA-211ENST00000559850 CLDN25C9JDP6 229 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 MLNRO43193 412 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 PRKYO43930 277 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 LMX1BO60663 402 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 HLA-DPB1P04440 258 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 CD55P08174 381 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 ADH4P08319 380 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 SELEP16581 610 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 HCCSP53701 268 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 RPS7P62081 194 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF92Q03936 586 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 APOFQ13790 326 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 TEX30Q5JUR7 227 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 CXXC5Q7LFL8 322 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF283Q8N7M2 679 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 OR8G5Q8NG78 346 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 KCNJ15Q99712 375 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 ABHD6Q9BV23 337 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 MARCH7Q9H992 704 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 DNAJC27Q9NZQ0 273 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 WIPI2Q9Y4P8 454 aa12.56□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF878C9JN71 531 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 F5H5P2 479 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 J3QW42 95 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 FCGR1AP12314 374 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 SLC2A5P22732 501 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 TNFSF4P23510 183 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 OTX1P32242 354 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 POLR2IP36954 125 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 CX3CR1P49238 355 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 BLVRAP53004 296 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 CDH15P55291 814 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 MALLQ13021 153 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 FAM166AQ6J272 317 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 DRAM2Q6UX65 266 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 ZDHHC13Q8IUH4 622 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 PARP8Q8N3A8 854 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 THEM6Q8WUY1 208 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 DNAJC9Q8WXX5 260 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 HPS1Q92902 700 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 ZNF582Q96NG8 517 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 OR2V2Q96R30 315 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 DIRC2Q96SL1 478 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 CIB1Q99828 191 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 PKP2Q99959 881 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 TTTY10Q9BZA0 68 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 BRD7Q9NPI1 651 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 TMEFF2Q9UIK5 374 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 KCNS2Q9ULS6 477 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 OAZ3Q9UMX2 235 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■□ 23.3
RABGGTA-211ENST00000559850 NAV3Q8IVL0 2385 aa12.55□□□□□ -0.4
RABGGTA-211ENST00000559850 ISPDA4D126 451 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 CCDC182A6NF36 153 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 KIAA1324LA8MWY0 1029 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 IQCF6A8MYZ5 107 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 H3BNX3 289 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 EBAG9O00559 213 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 TBX1O43435 398 aa12.54□□□□□ -0.4
RABGGTA-211ENST00000559850 ANXA2P07355 339 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms