RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SGCAQ16586 387 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 HIST2H3PS2Q5TEC6 136 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 CLEC18BQ6UXF7 455 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 HIST2H3AQ71DI3 136 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 CCDC190Q86UF4 302 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 CROCCP3Q8IVE0 287 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 ZNF676Q8N7Q3 588 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 CLEC18CQ8NCF0 446 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 OR1K1Q8NGR3 316 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 OR2AJ1Q8NGZ0 328 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 AP3S1Q92572 193 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 HTRA1Q92743 480 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 BOD1Q96IK1 185 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 WDFY2Q96P53 400 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 ZNF416Q9BWM5 594 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 PALMDQ9NP74 551 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 G6PC2Q9NQR9 355 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 CENPMQ9NSP4 180 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 ASH2LQ9UBL3 628 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 POLR1DQ9Y2S0 133 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 A0A0G2JK05 382 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 SMIM30A4D0T7 59 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 J3QRK9 145 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 NCR1O76036 304 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 CFL1P23528 166 aaKnown RBP14.43□□□□□ -0.1
TPM1-219ENST00000559397 GABRA6Q16445 453 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 NRN1LQ496H8 165 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 Q499Y3 187 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 FAM27BQ5VT28 67 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 ATF6BQ99941 703 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 ZCCHC4Q9H5U6 513 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 NIPAL2Q9H841 368 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 NOX4Q9NPH5 578 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 KCNJ16Q9NPI9 418 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 SLC22A13Q9Y226 551 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 ADGRG4Q8IZF6 3080 aa14.43□□□□□ -0.1
TPM1-219ENST00000559397 TRBV5-7A0A0A0MS05 114 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 ZNF878C9JN71 531 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 B4GALT1P15291 398 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 NPR2P20594 1047 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 TGFBR3Q03167 851 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 HSD17B12Q53GQ0 312 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 CEP78Q5JTW2 689 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 ZNF813Q6ZN06 617 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 C1orf162Q8NEQ5 155 aaPredicted RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 GPR148Q8TDV2 347 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 BCL2L2Q92843 193 aaPredicted RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 RNASE6Q93091 150 aaKnown RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 SLC24A3Q9HC58 644 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 FAM206AQ9NX38 181 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 HCFC1P51610 2035 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 A0A1W2PPK0 400 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 ACOD1A6NK06 481 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 LOC110117498-PIK3R3F6TDL0 507 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 RER1O15258 196 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 RAD51DO75771 328 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 AGFG2O95081 481 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 RAF1P04049 648 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 ISG15P05161 165 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 MAPK3P27361 379 aaPredicted RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 CCKARP32238 428 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 TNFSF8P32971 234 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 MAGEB1P43366 347 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 ZNF45Q02386 682 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 ANKRD16Q6P6B7 361 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 KLHL24Q6TFL4 600 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 BHLHA15Q7RTS1 189 aaPredicted RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 RDH10Q8IZV5 341 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 SLC22A24Q8N4F4 322 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 OR10AC1Q8NH08 325 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 THRSPQ92748 146 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 PPP1R14AQ96A00 147 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 MIXL1Q9H2W2 232 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 DDX28Q9NUL7 540 aaKnown RBP14.42□□□□□ -0.1
TPM1-219ENST00000559397 OR52A1Q9UKL2 312 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 CMAHPQ9Y471 501 aa14.42□□□□□ -0.1
TPM1-219ENST00000559397 A0A096LPE4 126 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 TMEM269A0A1B0GVZ9 245 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 A0A1W2PPZ6 126 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 CIB4A0PJX0 185 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 SRMP19623 302 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 RAB3BP20337 219 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 CD40LGP29965 261 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 PPP5CP53041 499 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 GJC3Q8NFK1 279 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 ACOT12Q8WYK0 555 aa14.41□□□□□ -0.1
TPM1-219ENST00000559397 KCTD12Q96CX2 325 aaKnown RBP14.41□□□□□ -0.1
TPM1-219ENST00000559397 USP9XQ93008 2570 aaPredicted RBP14.41□□□□□ -0.1
TPM1-219ENST00000559397 C16orf97H3BN30 126 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 CST2P09228 141 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 OCM2P0CE71 109 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 GRNP28799 593 aaKnown RBP14.4□□□□□ -0.1
TPM1-219ENST00000559397 THBS2P35442 1172 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 OR10A3P58181 314 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 PSMA6P60900 246 aaKnown RBP14.4□□□□□ -0.1
TPM1-219ENST00000559397 TBRG1Q3YBR2 411 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 HIKESHIQ53FT3 197 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 DDI2Q5TDH0 399 aa14.4□□□□□ -0.1
TPM1-219ENST00000559397 SFXN4Q6P4A7 337 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms