RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 OR8B3Q8NGG8 313 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 OR11L1Q8NGX0 322 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 GNPDA2Q8TDQ7 276 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 TAF15Q92804 592 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM1-211ENST00000558314 NEIL1Q96FI4 390 aaPredicted RBP13.02□□□□□ -0.33
TPM1-211ENST00000558314 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 DHRS1Q96LJ7 313 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 OR8B2Q96RD0 313 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 CDRT15Q96T59 188 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 SLC30A2Q9BRI3 323 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 FUZQ9BT04 418 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 MMADHCQ9H3L0 296 aaPredicted RBP13.02□□□□□ -0.33
TPM1-211ENST00000558314 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 TNFRSF19Q9NS68 423 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 MIOXQ9UGB7 285 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 OR6C68A6NDL8 312 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 A8MXK9 166 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 ARPC2O15144 300 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 PRTN3P24158 256 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 GGT2P36268 569 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 PMELP40967 661 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 PITPNBP48739 271 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 TPTEP56180 551 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 HIST1H3AP68431 136 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 HOXA4Q00056 320 aaPredicted RBP13.01□□□□□ -0.33
TPM1-211ENST00000558314 GK2Q14410 553 aaPredicted RBP13.01□□□□□ -0.33
TPM1-211ENST00000558314 OR8G1Q15617 311 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 HIST2H3PS2Q5TEC6 136 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 HIST2H3AQ71DI3 136 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 ZDHHC21Q8IVQ6 265 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 PROKR2Q8NFJ6 384 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 OR52L1Q8NGH7 329 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 OR51L1Q8NGJ5 315 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 SGMS2Q8NHU3 365 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 ZNF48Q96MX3 618 aaPredicted RBP13.01□□□□□ -0.33
TPM1-211ENST00000558314 GORASP2Q9H8Y8 452 aa13.01□□□□□ -0.33
TPM1-211ENST00000558314 TRAV40A0A0B4J280 105 aa13□□□□□ -0.33
TPM1-211ENST00000558314 IGHV2-70DA0A0C4DH43 119 aa13□□□□□ -0.33
TPM1-211ENST00000558314 MDFIC2A0A1B0GVS7 189 aa13□□□□□ -0.33
TPM1-211ENST00000558314 GGT3PA6NGU5 568 aa13□□□□□ -0.33
TPM1-211ENST00000558314 ARPC3O15145 178 aa13□□□□□ -0.33
TPM1-211ENST00000558314 CA6P23280 308 aa13□□□□□ -0.33
TPM1-211ENST00000558314 FOXL1Q12952 345 aa13□□□□□ -0.33
TPM1-211ENST00000558314 ECH1Q13011 328 aa13□□□□□ -0.33
TPM1-211ENST00000558314 TAF13Q15543 124 aa13□□□□□ -0.33
TPM1-211ENST00000558314 RSPO1Q2MKA7 263 aaPredicted RBP13□□□□□ -0.33
TPM1-211ENST00000558314 SAMD4BQ5PRF9 694 aaKnown RBP13□□□□□ -0.33
TPM1-211ENST00000558314 LYPD2Q6UXB3 125 aa13□□□□□ -0.33
TPM1-211ENST00000558314 LRRN1Q6UXK5 716 aa13□□□□□ -0.33
TPM1-211ENST00000558314 CYP2R1Q6VVX0 501 aa13□□□□□ -0.33
TPM1-211ENST00000558314 SPATC1Q76KD6 591 aa13□□□□□ -0.33
TPM1-211ENST00000558314 DOK3Q7L591 496 aa13□□□□□ -0.33
TPM1-211ENST00000558314 OR9Q2Q8NGE9 314 aa13□□□□□ -0.33
TPM1-211ENST00000558314 OR2AE1Q8NHA4 323 aa13□□□□□ -0.33
TPM1-211ENST00000558314 RAB40AQ8WXH6 277 aa13□□□□□ -0.33
TPM1-211ENST00000558314 SPTSSAQ969W0 71 aa13□□□□□ -0.33
TPM1-211ENST00000558314 NUDT16L1Q9BRJ7 211 aaKnown RBP13□□□□□ -0.33
TPM1-211ENST00000558314 CLN8Q9UBY8 286 aa13□□□□□ -0.33
TPM1-211ENST00000558314 POLR3KQ9Y2Y1 108 aaPredicted RBP13□□□□□ -0.33
TPM1-211ENST00000558314 M0R135 149 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 FAM20BO75063 409 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 SEMG1P04279 462 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 HKR1P10072 659 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 MTNR1AP48039 350 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 PAX8Q06710 450 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 MAB21L1Q13394 359 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 MPPED2Q15777 294 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 ZNF404Q494X3 552 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
TPM1-211ENST00000558314 PGBD2Q6P3X8 592 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 LYPD4Q6UWN0 246 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 BRD3OSQ6XYD6 125 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 ZNF620Q6ZNG0 422 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 OR9Q1Q8NGQ5 310 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 SLC25A28Q96A46 364 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 ZNF799Q96GE5 643 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 TECTBQ96PL2 329 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 ARL8BQ9NVJ2 186 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 MRPL22Q9NWU5 206 aaKnown RBP12.99□□□□□ -0.33
TPM1-211ENST00000558314 CYB5R1Q9UHQ9 305 aa12.99□□□□□ -0.33
TPM1-211ENST00000558314 C3orf80F5H4A9 247 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 TNFRSF11BO00300 401 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 SNX3O60493 162 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 SPARCP09486 303 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 SLC2A1P11166 492 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 HSD17B1P14061 328 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 GSSP48637 474 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 PRKXP51817 358 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 FGF12P61328 243 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 PPP1R8Q12972 351 aaKnown RBP12.98□□□□□ -0.33
TPM1-211ENST00000558314 TSPAN31Q12999 210 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 OR8B8Q15620 311 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 SNAI3Q3KNW1 292 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 COLCA1Q6ZS62 124 aa12.98□□□□□ -0.33
TPM1-211ENST00000558314 ZBTB46Q86UZ6 589 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms