RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 LOC100509620A0A075B734 347 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 WIPF3A6NGB9 483 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 LRRC3CA6NJW4 275 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 LOC400499M0QZD8 3231 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 CDX4O14627 284 aaPredicted RBP9.32□□□□□ -0.92
TPM1-210ENST00000558264 ZNHIT1O43257 154 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 TLX3O43711 291 aaPredicted RBP9.32□□□□□ -0.92
TPM1-210ENST00000558264 CXCL13O43927 109 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 PATE4P0C8F1 98 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 CD59P13987 128 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 SSTR2P30874 369 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
TPM1-210ENST00000558264 UNC119Q13432 240 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 C1QTNF12Q5T7M4 302 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 GALNT16Q8N428 558 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 ZIC4Q8N9L1 334 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 CHST4Q8NCG5 386 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 ZNF431Q8TF32 576 aaPredicted RBP9.32□□□□□ -0.92
TPM1-210ENST00000558264 DOCK10Q96BY6 2186 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 PIGQQ9BRB3 760 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 STRADBQ9C0K7 418 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 RHBDD3Q9Y3P4 386 aa9.32□□□□□ -0.92
TPM1-210ENST00000558264 A0A1W2PP11 408 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ZNF780AO75290 641 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 NDUFB6O95139 128 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 IGHV3-9P01782 118 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SULT1A3P0DMM9 295 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SULT1A4P0DMN0 295 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 VSIG10L2P0DP72 767 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 GDF1P27539 372 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 DLSTP36957 453 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 B3GALT5-AS1P59052 145 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TNK1Q13470 666 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TMEM81Q6P7N7 255 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 CHMP1BQ7LBR1 199 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 FGD2Q7Z6J4 655 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 C9orf62Q8N4C0 152 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SEH1LQ96EE3 360 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SFXN2Q96NB2 322 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SORCS2Q96PQ0 1159 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ALKBH3Q96Q83 286 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 NICN1Q9BSH3 213 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ULBP2Q9BZM5 246 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TINAGL1Q9GZM7 467 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 CHST6Q9GZX3 395 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 NAP1L6A6NFF2 107 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TNFRSF10AO00220 468 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ICMTO60725 284 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TMEM127O75204 238 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SIX6O95475 246 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 LIPCP11150 499 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 RAB3AP20336 220 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 GUCA1AP43080 201 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 OR3A4PP47883 348 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 RAC1P63000 192 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ENDOGQ14249 297 aaKnown RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 CSRP2Q16527 193 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 NKPD1Q17RQ9 610 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ELFN2Q5R3F8 820 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 AWAT2Q6E213 333 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 DBX2Q6ZNG2 339 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 NAXDQ8IW45 347 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ZNF101Q8IZC7 436 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TMEM123Q8N131 208 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 PAQR4Q8N4S7 273 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 GVQW1Q8N7I0 195 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 OR2T35Q8NGX2 323 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 NUDCD2Q8WVJ2 157 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 PSMF1Q92530 271 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ZNF845Q96IR2 970 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 TAAR9Q96RI9 348 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ACTR6Q9GZN1 396 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 TMEM138Q9NPI0 162 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 RABL2AQ9UBK7 228 aaPredicted RBP9.31□□□□□ -0.92
TPM1-210ENST00000558264 MGAT4CQ9UBM8 478 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 SLC23A1Q9UHI7 598 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 ING4Q9UNL4 249 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 RABL2BQ9UNT1 228 aa9.31□□□□□ -0.92
TPM1-210ENST00000558264 CELA3AP09093 270 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CSF1P09603 554 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 GNB3P16520 340 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 ZNF17P17021 662 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 MSR1P21757 451 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CFPP27918 469 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 ZNF93P35789 620 aaPredicted RBP9.3□□□□□ -0.92
TPM1-210ENST00000558264 CYB561P49447 251 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 SCAND1P57086 179 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CSNK2A1P68400 391 aaPredicted RBP9.3□□□□□ -0.92
TPM1-210ENST00000558264 SRYQ05066 204 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 SSPNQ14714 243 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 STEAP1BQ6NZ63 245 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 LINC00696Q6ZRV3 163 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 DNM1P46Q6ZS02 220 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 NLRC3Q7RTR2 1065 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 HDDC2Q7Z4H3 204 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 ANGPTL5Q86XS5 388 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 GABRG1Q8N1C3 465 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 MEIOBQ8N635 442 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms