RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 GLDNQ6ZMI3 551 aaPredicted RBP9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 NAA40Q86UY6 237 aa9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 OSTF1Q92882 214 aa9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 PROK2Q9HC23 129 aa9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 SRA1Q9HD15 236 aaKnown RBP9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 MED29Q9NX70 200 aa9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 KLHL13Q9P2N7 655 aa9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 CHRNA9Q9UGM1 479 aa9.46□□□□□ -0.89
PPP1R3E-202ENST00000558058 TMEM272A0A1B0GTI8 110 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ARRDC5A6NEK1 342 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 KLF4O43474 513 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 RAMP1O60894 148 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 FBP1P09467 338 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 LIPCP11150 499 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ADH6P28332 368 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 CDK5Q00535 292 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 SORDQ00796 357 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 RAB40BQ12829 278 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 RBM39Q14498 530 aaKnown RBP9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ALG10Q5BKT4 473 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 C1orf140Q5VVS0 124 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 GRINAQ7Z429 371 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ZNF227Q86WZ6 799 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ZNF440Q8IYI8 595 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 MEIOBQ8N635 442 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 FDCSPQ8NFU4 85 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 OR14L1PQ8NHC6 308 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 THEM6Q8WUY1 208 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 GTF3AQ92664 365 aaKnown RBP9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ZMYND19Q96E35 227 aaPredicted RBP9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 ZNF426Q9BUY5 554 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 NOX3Q9HBY0 568 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 RASL12Q9NYN1 266 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 PCDHB10Q9UN67 800 aa9.46□□□□□ -0.9
PPP1R3E-202ENST00000558058 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 AHSA1O95433 338 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 PSMB1P20618 241 aaKnown RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 GDF1P27539 372 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 BDKRB2P30411 391 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 PYCR1P32322 319 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 EIF2S3P41091 472 aaKnown RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 MTNR1BP49286 362 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 MMP15P51511 669 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 ARG2P78540 354 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 OR1C1Q15619 314 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 C3AR1Q16581 482 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 ADAMTS17Q8TE56 1095 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 ZNRF4Q8WWF5 429 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 PMM1Q92871 262 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 PFDN5Q99471 154 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 PTGES2Q9H7Z7 377 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 H2AFY2Q9P0M6 372 aaPredicted RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 A0A1W2PQD3 144 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 SURF4O15260 269 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 DKK1O94907 266 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 RCBTB2O95199 551 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 OR6A2O95222 327 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 PNMTP11086 282 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 APEHP13798 732 aaKnown RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 CNR1P21554 472 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 S100PP25815 95 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 SLC6A8P48029 635 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 POLR2HP52434 150 aaKnown RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 CARD17Q5XLA6 110 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 TMPRSS11FQ6ZWK6 438 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 CXXC5Q7LFL8 322 aaKnown RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 OR2M3Q8NG83 312 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 OR52I2Q8NH67 350 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 CPNE2Q96FN4 548 aaPredicted RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 NAA11Q9BSU3 229 aaPredicted RBP9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 TMPRSS13Q9BYE2 586 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
PPP1R3E-202ENST00000558058 A0A1B0GUH1 482 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 TMEM82A0PJX8 343 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 COLCA2A8K830 154 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 GOSR2O14653 212 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 PRODHO43272 600 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 IGHEP01854 428 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 S100A9P06702 114 aaKnown RBP9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 DCTDP32321 178 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 LUMP51884 338 aaPredicted RBP9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 RAG2P55895 527 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 RAP2BP61225 183 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 FHL1Q13642 323 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 PLPPR5Q32ZL2 321 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 H3F3CQ6NXT2 135 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 RNF113BQ8IZP6 322 aaKnown RBP9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 LINC00471Q8N535 108 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 SPICQ8N5J4 248 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 TMEM234Q8WY98 164 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 PNPLA2Q96AD5 504 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 UTP23Q9BRU9 249 aaKnown RBP9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 MFFQ9GZY8 342 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 ALKBH4Q9NXW9 302 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 FREM1Q5H8C1 2179 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 ZNF814B7Z6K7 855 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 UBE2CO00762 179 aa9.44□□□□□ -0.9
PPP1R3E-202ENST00000558058 BHLHE40O14503 412 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms